Functional clusters
Information
- Type MapMan
- Description Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 1 | CH_arhy_764 | 2 | 5 | 0.000898083 |
| Fragaria vesca | Fvb5 | 1 | CH_fve_448 | 2 | 5 | 0.00058905 |
| Lonicera japonica | GWHAAZE00000005 | 1 | CH_lonja_523 | 2 | 4 | 0.000359303 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 2 | CH_arhy_764 | 2 | 5 | 0.000898083 |
| Fragaria vesca | Fvb5 | 2 | CH_fve_448 | 2 | 5 | 0.00058905 |
| Lonicera japonica | GWHAAZE00000005 | 2 | CH_lonja_523 | 2 | 4 | 0.000359303 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |