Functional clusters
Information
- Type MapMan
- Description Polyamine metabolism.polyamine conjugation.spermidine hydroxycinnamoyl transferase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Davidia involucrata | GWHABJS00000013 | 1 | CH_din_378 | 2 | 2 | 0.000150038 |
Glycine max | Gm17 | 1 | CH_gma_331 | 2 | 2 | 0.0000379557 |
Hydrangea macrophylla | Hma1.2p1_0314F.1 | 1 | CH_hma_403 | 2 | 2 | 0.000666519 |
Phaseolus vulgaris | Chr03 | 1 | CH_pvu_314 | 2 | 2 | 0.0000734727 |
Rhododendron simsii | chr01 | 1 | CH_rsi_47 | 6 | 14 | 5.29175e-16 |
Solanum pennellii | Spenn-ch07 | 1 | CH_spe_345 | 2 | 3 | 0.000133434 |
Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_120 | 3 | 4 | 0.000000207229 |
Davidia involucrata | GWHABJS00000013 | 2 | CH_din_378 | 2 | 2 | 0.000150038 |
Glycine max | Gm17 | 2 | CH_gma_331 | 2 | 2 | 0.0000379557 |
Hydrangea macrophylla | Hma1.2p1_0314F.1 | 2 | CH_hma_403 | 2 | 2 | 0.000666519 |
Lotus japonicus | chr4 | 2 | CH_lja_283 | 2 | 2 | 0.0000715077 |
Phaseolus vulgaris | Chr03 | 2 | CH_pvu_314 | 2 | 2 | 0.0000734727 |
Rhododendron simsii | chr01 | 2 | CH_rsi_47 | 6 | 14 | 5.29175e-16 |
Solanum pennellii | Spenn-ch07 | 2 | CH_spe_345 | 2 | 3 | 0.000133434 |
Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_120 | 3 | 4 | 0.000000207229 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |