Functional clusters

Information

  • Type MapMan
  • Description Polyamine metabolism.polyamine conjugation.spermidine hydroxycinnamoyl transferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Davidia involucrata GWHABJS00000013 1 CH_din_378 2 2 0.000150038
Glycine max Gm17 1 CH_gma_331 2 2 0.0000379557
Hydrangea macrophylla Hma1.2p1_0314F.1 1 CH_hma_403 2 2 0.000666519
Phaseolus vulgaris Chr03 1 CH_pvu_314 2 2 0.0000734727
Rhododendron simsii chr01 1 CH_rsi_47 6 14 5.29175e-16
Solanum pennellii Spenn-ch07 1 CH_spe_345 2 3 0.000133434
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_120 3 4 0.000000207229
Davidia involucrata GWHABJS00000013 2 CH_din_378 2 2 0.000150038
Glycine max Gm17 2 CH_gma_331 2 2 0.0000379557
Hydrangea macrophylla Hma1.2p1_0314F.1 2 CH_hma_403 2 2 0.000666519
Lotus japonicus chr4 2 CH_lja_283 2 2 0.0000715077
Phaseolus vulgaris Chr03 2 CH_pvu_314 2 2 0.0000734727
Rhododendron simsii chr01 2 CH_rsi_47 6 14 5.29175e-16
Solanum pennellii Spenn-ch07 2 CH_spe_345 2 3 0.000133434
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_120 3 4 0.000000207229

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001