Functional clusters

Information

  • Type MapMan
  • Description Polyamine metabolism.polyamine conjugation.spermidine disinapoyl transferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 1 CH_aar_88 3 3 0.00000149828
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 1 CH_arhy_65 6 12 0.00000000000000150074
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 1 CH_arhy_86 7 57 0.0000000000000615131
Brassica napus C07 1 CH_bna_164 4 13 0.0000000249037
Brassica napus C03 1 CH_bna_366 3 7 0.0000101143
Brassica napus A03 1 CH_bna_435 3 10 0.0000346673
Brassica oleracea C3 1 CH_bol_192 3 7 0.0000092508
Brassica oleracea C7 1 CH_bol_78 4 12 0.0000000170993
Brassica rapa A03 1 CH_bra_144 3 9 0.00000464277
Cannabis sativa NC_044375.1 1 CH_cansat_40 5 6 0.000000000000210833
Cannabis sativa NC_044375.1 1 CH_cansat_56 5 10 0.00000000000884899
Cardamine hirsuta Chr6 1 CH_chi_324 2 2 0.000207361
Carica papaya supercontig_2 1 CH_cpa_245 2 2 0.0000950661
Capsella rubella scaffold_4 1 CH_cru_120 3 3 0.0000000320764
Eutrema salsugineum scaffold_1 1 CH_esa_97 3 3 0.000000304449
Medicago truncatula chr3 1 CH_mtr_90 5 8 0.0000000000000251327
Schrenkiella parvula ch5-1 1 CH_spa_102 3 3 0.000000325462
Theobroma cacao Chromosome_9 1 CH_tca_303 2 2 0.0000732386
Trifolium pratense Tp57577_TGAC_v2_scaf_177 1 CH_tpr_401 2 3 0.000681233
Aethionema arabicum LG-4 2 CH_aar_88 3 3 0.00000149828
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 2 CH_arhy_65 6 12 0.00000000000000150074
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 2 CH_arhy_86 7 57 0.0000000000000615131
Brassica oleracea C3 2 CH_bol_192 3 7 0.0000092508
Brassica oleracea C7 2 CH_bol_78 4 12 0.0000000170993
Brassica rapa A03 2 CH_bra_144 3 9 0.00000464277
Cannabis sativa NC_044375.1 2 CH_cansat_40 5 6 0.000000000000210833
Cannabis sativa NC_044375.1 2 CH_cansat_56 5 10 0.00000000000884899
Cardamine hirsuta Chr6 2 CH_chi_324 2 2 0.000207361
Carica papaya supercontig_2 2 CH_cpa_245 2 2 0.0000950661
Capsella rubella scaffold_4 2 CH_cru_120 3 3 0.0000000320764
Eutrema salsugineum scaffold_1 2 CH_esa_97 3 3 0.000000304449
Lotus japonicus chr6 2 CH_lja_199 3 8 0.00000429345
Schrenkiella parvula ch5-1 2 CH_spa_102 3 3 0.000000325462
Theobroma cacao Chromosome_9 2 CH_tca_303 2 2 0.0000732386
Trifolium pratense Tp57577_TGAC_v2_scaf_177 2 CH_tpr_401 2 3 0.000681233

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001