Functional clusters
Information
- Type MapMan
- Description Polyamine metabolism.spermidine biosynthesis.S-adenosyl methionine decarboxylase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 1 | CH_amhyb_249 | 2 | 2 | 0.000505051 |
Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 1 | CH_bvu_242 | 2 | 2 | 0.000248375 |
Chenopodium quinoa | C_Quinoa_Scaffold_1426 | 1 | CH_cqu_572 | 2 | 2 | 0.000710732 |
Erigeron canadensis | Conyza_canadensis_scaffold:1 | 1 | CH_eca_470 | 2 | 2 | 0.000448722 |
Medicago truncatula | chr7 | 1 | CH_mtr_281 | 3 | 3 | 0.0000000886263 |
Physcomitrium patens | Chr09 | 1 | CH_ppa_345 | 2 | 2 | 0.000919089 |
Trifolium pratense | Tp57577_TGAC_v2_LG2 | 1 | CH_tpr_384 | 2 | 2 | 0.000454184 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 2 | CH_amhyb_249 | 2 | 2 | 0.000505051 |
Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 2 | CH_bvu_242 | 2 | 2 | 0.000248375 |
Chenopodium quinoa | C_Quinoa_Scaffold_1426 | 2 | CH_cqu_572 | 2 | 2 | 0.000710732 |
Erigeron canadensis | Conyza_canadensis_scaffold:1 | 2 | CH_eca_470 | 2 | 2 | 0.000448722 |
Physcomitrium patens | Chr09 | 2 | CH_ppa_345 | 2 | 2 | 0.000919089 |
Trifolium pratense | Tp57577_TGAC_v2_LG2 | 2 | CH_tpr_384 | 2 | 2 | 0.000454184 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |