Functional clusters

Information

  • Type MapMan
  • Description Polyamine metabolism.spermidine biosynthesis.S-adenosyl methionine decarboxylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_14 1 CH_amhyb_249 2 2 0.000505051
Beta vulgaris Chr8_EL10_PGA_scaffold4 1 CH_bvu_242 2 2 0.000248375
Chenopodium quinoa C_Quinoa_Scaffold_1426 1 CH_cqu_572 2 2 0.000710732
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_470 2 2 0.000448722
Medicago truncatula chr7 1 CH_mtr_281 3 3 0.0000000886263
Physcomitrium patens Chr09 1 CH_ppa_345 2 2 0.000919089
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_384 2 2 0.000454184
Amaranthus hybridus AmaHy_arrow1_Scaffold_14 2 CH_amhyb_249 2 2 0.000505051
Beta vulgaris Chr8_EL10_PGA_scaffold4 2 CH_bvu_242 2 2 0.000248375
Chenopodium quinoa C_Quinoa_Scaffold_1426 2 CH_cqu_572 2 2 0.000710732
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_470 2 2 0.000448722
Physcomitrium patens Chr09 2 CH_ppa_345 2 2 0.000919089
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_384 2 2 0.000454184

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001