Functional clusters
Information
- Type MapMan
- Description Polyamine metabolism.putrescine biosynthesis.plastidial/nuclear pathway.arginine decarboxylase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | Contig324 | 1 | CH_bca_328 | 3 | 6 | 0.000000479743 |
Brassica napus | C01 | 1 | CH_bna_180 | 3 | 3 | 0.0000000433643 |
Brassica rapa | A01 | 1 | CH_bra_285 | 2 | 2 | 0.000257588 |
Camellia sinensis var. sinensis | Chr3 | 1 | CH_camsi_943 | 2 | 3 | 0.000825341 |
Vanilla planifolia | CM028160.1 | 1 | CH_vpl_195 | 2 | 2 | 0.000073888 |
Brassica carinata | Contig324 | 2 | CH_bca_328 | 3 | 6 | 0.000000479743 |
Brassica rapa | A01 | 2 | CH_bra_285 | 2 | 2 | 0.000257588 |
Camellia sinensis var. sinensis | Chr3 | 2 | CH_camsi_943 | 2 | 3 | 0.000825341 |
Gossypium hirsutum | D04 | 2 | CH_ghi_792 | 2 | 2 | 0.000560733 |
Vanilla planifolia | CM028160.1 | 2 | CH_vpl_195 | 2 | 2 | 0.000073888 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |