Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.prenylquinone biosynthesis.plastoquinone biosynthesis.MSBQ-methyltransferase (APG1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-10 1 CH_aar_190 2 3 0.000273685
Carpinus fangiana Cfa02 1 CH_cfa_370 2 3 0.000681569
Magnolia biondii Chr04 1 CH_mbi_352 2 2 0.0000485661
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_382 2 2 0.000557543
Aethionema arabicum LG-10 2 CH_aar_190 2 3 0.000273685
Carpinus fangiana Cfa02 2 CH_cfa_370 2 3 0.000681569
Magnolia biondii Chr04 2 CH_mbi_352 2 2 0.0000485661
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_382 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001