Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.prenylquinone biosynthesis.ubiquinone biosynthesis.4-hydroxybenzoate:polyprenyl diphosphate transferase (COQ2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium hirsutum A12 1 CH_ghi_233 3 4 0.0000000855542
Malus domestica Chr11 1 CH_mdo_503 2 2 0.000113763
Oryza sativa ssp. japonica chr08 1 CH_osa_279 2 2 0.000158437
Prunus persica Pp01 1 CH_ppe_422 2 2 0.000223789
Populus trichocarpa Chr05 1 CH_ptr_321 2 2 0.0000578001
Quercus lobata 8 1 CH_qlo_903 2 2 0.000309773
Trochodendron aralioides group12 1 CH_tar_125 3 4 0.0000000865036
Gossypium hirsutum A12 2 CH_ghi_233 3 4 0.0000000855542
Malus domestica Chr11 2 CH_mdo_503 2 2 0.000113763
Oryza sativa ssp. japonica chr08 2 CH_osa_279 2 2 0.000158437
Prunus persica Pp01 2 CH_ppe_422 2 2 0.000223789
Populus trichocarpa Chr05 2 CH_ptr_321 2 2 0.0000578001
Quercus lobata 8 2 CH_qlo_903 2 2 0.000309773
Trochodendron aralioides group12 2 CH_tar_125 3 4 0.0000000865036

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001