Functional clusters
Information
- Type MapMan
- Description Coenzyme metabolism.prenylquinone biosynthesis.ubiquinone biosynthesis.4-hydroxybenzoate:polyprenyl diphosphate transferase (COQ2)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Gossypium hirsutum | A12 | 1 | CH_ghi_233 | 3 | 4 | 0.0000000855542 |
Malus domestica | Chr11 | 1 | CH_mdo_503 | 2 | 2 | 0.000113763 |
Oryza sativa ssp. japonica | chr08 | 1 | CH_osa_279 | 2 | 2 | 0.000158437 |
Prunus persica | Pp01 | 1 | CH_ppe_422 | 2 | 2 | 0.000223789 |
Populus trichocarpa | Chr05 | 1 | CH_ptr_321 | 2 | 2 | 0.0000578001 |
Quercus lobata | 8 | 1 | CH_qlo_903 | 2 | 2 | 0.000309773 |
Trochodendron aralioides | group12 | 1 | CH_tar_125 | 3 | 4 | 0.0000000865036 |
Gossypium hirsutum | A12 | 2 | CH_ghi_233 | 3 | 4 | 0.0000000855542 |
Malus domestica | Chr11 | 2 | CH_mdo_503 | 2 | 2 | 0.000113763 |
Oryza sativa ssp. japonica | chr08 | 2 | CH_osa_279 | 2 | 2 | 0.000158437 |
Prunus persica | Pp01 | 2 | CH_ppe_422 | 2 | 2 | 0.000223789 |
Populus trichocarpa | Chr05 | 2 | CH_ptr_321 | 2 | 2 | 0.0000578001 |
Quercus lobata | 8 | 2 | CH_qlo_903 | 2 | 2 | 0.000309773 |
Trochodendron aralioides | group12 | 2 | CH_tar_125 | 3 | 4 | 0.0000000865036 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |