Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.pyridoxalphosphate biosynthesis.pyridoxal 5'-phosphate synthase complex.glutaminase component

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB08 1 CH_bca_721 2 2 0.000128259
Carya illinoinensis Chr13 1 CH_cil_523 2 5 0.000619771
Carica papaya supercontig_216 1 CH_cpa_238 2 2 0.0000950661
Erythranthe guttata scaffold_4 1 CH_egut_460 2 5 0.000728067
Lonicera japonica GWHAAZE00000002 1 CH_lonja_588 2 3 0.00053896
Magnolia biondii Chr07 1 CH_mbi_127 3 4 0.000000014152
Malus domestica Chr03 1 CH_mdo_625 2 3 0.00034128
Olea europaea chr11 1 CH_oeu_265 2 2 0.000160137
Rhododendron simsii chr13 1 CH_rsi_455 2 2 0.000193592
Sapria himalayana scaffold2_22354274 1 CH_shi_123 2 2 0.0000571804
Trochodendron aralioides group1 1 CH_tar_383 2 2 0.00018011
Brassica carinata ChrB08 2 CH_bca_721 2 2 0.000128259
Carya illinoinensis Chr13 2 CH_cil_523 2 5 0.000619771
Carica papaya supercontig_216 2 CH_cpa_238 2 2 0.0000950661
Erythranthe guttata scaffold_4 2 CH_egut_460 2 5 0.000728067
Lonicera japonica GWHAAZE00000002 2 CH_lonja_588 2 3 0.00053896
Magnolia biondii Chr07 2 CH_mbi_127 3 4 0.000000014152
Malus domestica Chr03 2 CH_mdo_625 2 3 0.00034128
Olea europaea chr11 2 CH_oeu_265 2 2 0.000160137
Rhododendron simsii chr13 2 CH_rsi_455 2 2 0.000193592
Sapria himalayana scaffold2_22354274 2 CH_shi_123 2 2 0.0000571804
Trochodendron aralioides group1 2 CH_tar_383 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001