Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.tetrahydrofolate metabolism.tetrahydrofolate (THF) interconversions.bifunctional 5,10-methylene-THF dehydrogenase and 5,10-methenyl-THF cyclohydrolase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 1 CH_aly_112 3 3 0.0000000653509
Arabidopsis thaliana Chr4 1 CH_ath_393 2 3 0.000515668
Amborella trichopoda AmTr_v1.0_scaffold00045 1 CH_atr_99 3 3 0.000000331332
Ceratophyllum demersum 10 1 CH_cde_250 2 2 0.000473878
Capsella rubella scaffold_6 1 CH_cru_32 5 5 0.0000000000000120055
Eutrema salsugineum scaffold_3 1 CH_esa_290 2 2 0.000456899
Papaver somniferum NC_039368.1 1 CH_pso_302 4 30 0.000000937886
Salvia bowleyana GWHASIU00000001 1 CH_sbo_119 4 18 0.0000000129593
Simmondsia chinensis GWHAASQ00000023 1 CH_sci_309 2 2 0.000851426
Sequoiadendron giganteum chr7 1 CH_sgi_648 3 7 0.0000043591
Solanum tuberosum ST4.03ch10 1 CH_stu_637 2 3 0.00092236
Utricularia gibba unitig_0 1 CH_ugi_266 2 2 0.000440755
Vanilla planifolia CM028162.1 1 CH_vpl_272 2 2 0.000221664
Arabidopsis lyrata scaffold_6 2 CH_aly_112 3 3 0.0000000653509
Arabidopsis thaliana Chr4 2 CH_ath_393 2 3 0.000515668
Amborella trichopoda AmTr_v1.0_scaffold00045 2 CH_atr_99 3 3 0.000000331332
Ceratophyllum demersum 10 2 CH_cde_250 2 2 0.000473878
Capsella rubella scaffold_6 2 CH_cru_32 5 5 0.0000000000000120055
Eucalyptus grandis Chr10 2 CH_egr_310 4 6 0.00000000113651
Eutrema salsugineum scaffold_3 2 CH_esa_290 2 2 0.000456899
Papaver somniferum NC_039368.1 2 CH_pso_302 4 30 0.000000937886
Salvia bowleyana GWHASIU00000001 2 CH_sbo_119 4 18 0.0000000129593
Simmondsia chinensis GWHAASQ00000023 2 CH_sci_309 2 2 0.000851426
Sequoiadendron giganteum chr7 2 CH_sgi_648 3 7 0.0000043591
Solanum tuberosum ST4.03ch10 2 CH_stu_637 2 3 0.00092236
Utricularia gibba unitig_0 2 CH_ugi_266 2 2 0.000440755
Vanilla planifolia CM028162.1 2 CH_vpl_272 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001