Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.tetrahydrofolate metabolism.pterin biosynthesis.Nudix-type hydrolase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR03 1 CH_aox_241 2 2 0.000240597
Amborella trichopoda AmTr_v1.0_scaffold00087 1 CH_atr_209 2 2 0.0000794407
Coffea canephora chr11 1 CH_ccan_231 2 7 0.0000894361
Carya illinoinensis Chr05 1 CH_cil_367 2 2 0.0000619828
Citrullus lanatus CG_Chr05 1 CH_cla_205 2 2 0.000532269
Daucus carota DCARv2_Chr8 1 CH_dca_377 2 2 0.000382665
Fragaria x ananassa Fvb4-3 1 CH_fan_57 4 6 0.000000000203814
Fragaria vesca Fvb4 1 CH_fve_69 4 8 0.000000000214638
Helianthus annuus HanXRQChr16 1 CH_han_523 2 2 0.000115929
Malus domestica Chr13 1 CH_mdo_199 3 4 0.0000000862784
Malus domestica Chr16 1 CH_mdo_657 2 2 0.000379212
Petunia axillaris Peaxi162Scf00367 1 CH_pax_336 2 3 0.000633164
Prunus persica Pp01 1 CH_ppe_84 4 4 0.00000000000622717
Populus trichocarpa Chr08 1 CH_ptr_320 2 2 0.0000578001
Quercus lobata 3 1 CH_qlo_540 3 18 0.00000326144
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_366 3 5 0.00000200204
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_79 5 7 0.0000000000000501194
Striga asiatica scaffold14 1 CH_sas_68 2 2 0.0000625371
Aquilegia oxysepala CHR03 2 CH_aox_241 2 2 0.000240597
Amborella trichopoda AmTr_v1.0_scaffold00087 2 CH_atr_209 2 2 0.0000794407
Coffea canephora chr11 2 CH_ccan_231 2 7 0.0000894361
Carya illinoinensis Chr05 2 CH_cil_367 2 2 0.0000619828
Citrullus lanatus CG_Chr05 2 CH_cla_205 2 2 0.000532269
Daucus carota DCARv2_Chr8 2 CH_dca_377 2 2 0.000382665
Fragaria x ananassa Fvb4-3 2 CH_fan_57 4 6 0.000000000203814
Fragaria vesca Fvb4 2 CH_fve_69 4 8 0.000000000214638
Helianthus annuus HanXRQChr16 2 CH_han_523 2 2 0.000115929
Malus domestica Chr13 2 CH_mdo_199 3 4 0.0000000862784
Malus domestica Chr16 2 CH_mdo_657 2 2 0.000379212
Petunia axillaris Peaxi162Scf00367 2 CH_pax_336 2 3 0.000633164
Prunus persica Pp01 2 CH_ppe_84 4 4 0.00000000000622717
Populus trichocarpa Chr08 2 CH_ptr_320 2 2 0.0000578001
Quercus lobata 3 2 CH_qlo_540 3 18 0.00000326144
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_366 3 5 0.00000200204
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_79 5 7 0.0000000000000501194
Striga asiatica scaffold14 2 CH_sas_68 2 2 0.0000625371

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001