Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.tetrahydrofolate metabolism.pterin biosynthesis.GTP-cyclohydrolase (GCH1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC05 1 CH_bca_308 3 5 0.000000383805
Brassica oleracea C5 1 CH_bol_313 2 2 0.000196117
Camellia sinensis var. sinensis Chr4 1 CH_camsi_917 2 4 0.000825322
Chenopodium quinoa C_Quinoa_Scaffold_3514 1 CH_cqu_457 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2716 1 CH_cqu_458 2 2 0.000284293
Vigna mungo CM024078.1 1 CH_vmu_104 3 5 0.000000250479
Brassica carinata ChrC05 2 CH_bca_308 3 5 0.000000383805
Brassica oleracea C5 2 CH_bol_313 2 2 0.000196117
Camellia sinensis var. sinensis Chr4 2 CH_camsi_917 2 4 0.000825322
Chenopodium quinoa C_Quinoa_Scaffold_3514 2 CH_cqu_457 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2716 2 CH_cqu_458 2 2 0.000284293
Vigna mungo CM024078.1 2 CH_vmu_104 3 5 0.000000250479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001