Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.S-adenosyl methionine (SAM) cycle.S-adenosyl methionine synthetase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Helianthus annuus HanXRQChr01 1 CH_han_739 2 2 0.0008115
Magnolia biondii Chr19 1 CH_mbi_571 2 3 0.000437077
Physcomitrium patens Chr22 1 CH_ppa_36 3 4 0.00000022525
Phaseolus vulgaris Chr03 1 CH_pvu_210 3 4 0.00000388598
Salvia bowleyana GWHASIU00000006 1 CH_sbo_110 4 10 0.00000000415141
Sequoiadendron giganteum chr1 1 CH_sgi_584 3 8 0.000000797233
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_90 3 3 0.0000000129529
Eucalyptus grandis Chr10 2 CH_egr_536 3 6 0.00000205475
Helianthus annuus HanXRQChr01 2 CH_han_739 2 2 0.0008115
Magnolia biondii Chr19 2 CH_mbi_571 2 3 0.000437077
Physcomitrium patens Chr22 2 CH_ppa_36 3 4 0.00000022525
Phaseolus vulgaris Chr03 2 CH_pvu_210 3 4 0.00000388598
Salvia bowleyana GWHASIU00000006 2 CH_sbo_110 4 10 0.00000000415141
Sequoiadendron giganteum chr1 2 CH_sgi_584 3 8 0.000000797233
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_90 3 3 0.0000000129529

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001