Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.thiamine pyrophosphate biosynthesis.hydroxymethylpyrimidine diphosphate biosynthesis.bifunctional hydroxymethylpyrimidine kinase and thiamine-phosphate diphosphorylase (Th1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 1 CH_acertr_349 2 2 0.000070497
Chara braunii BFEA01000127 1 CH_cbr_104 2 3 0.000215773
Carica papaya supercontig_31 1 CH_cpa_77 3 7 0.000000474404
Cucumis sativus L. chr5 1 CH_csa_129 3 8 0.000000585234
Hydrangea macrophylla Hma1.2p1_1108F.1 1 CH_hma_290 2 2 0.000111086
Malus domestica Chr15 1 CH_mdo_577 2 2 0.000227527
Malus domestica Chr08 1 CH_mdo_578 2 2 0.000227527
Acer truncatum chr6 2 CH_acertr_349 2 2 0.000070497
Chara braunii BFEA01000127 2 CH_cbr_104 2 3 0.000215773
Carica papaya supercontig_31 2 CH_cpa_77 3 7 0.000000474404
Cucumis sativus L. chr5 2 CH_csa_129 3 8 0.000000585234
Hydrangea macrophylla Hma1.2p1_1108F.1 2 CH_hma_290 2 2 0.000111086
Malus domestica Chr15 2 CH_mdo_577 2 2 0.000227527
Malus domestica Chr08 2 CH_mdo_578 2 2 0.000227527

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001