Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.tetrapyrrol biosynthesis.heme biosynthesis and modification.ferrochelatase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr0 1 CH_ccan_165 2 12 0.0000127767
Lonicera japonica GWHAAZE00000008 1 CH_lonja_269 3 8 0.00000301162
Magnolia biondii Chr04 1 CH_mbi_596 2 5 0.000485625
Physcomitrium patens Chr01 1 CH_ppa_258 2 2 0.000367636
Sequoiadendron giganteum chr10 1 CH_sgi_1142 2 2 0.000146145
Utricularia gibba unitig_744 1 CH_ugi_300 2 2 0.000734592
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_339 2 2 0.000278772
Coffea canephora chr0 2 CH_ccan_165 2 12 0.0000127767
Lonicera japonica GWHAAZE00000008 2 CH_lonja_269 3 8 0.00000301162
Magnolia biondii Chr04 2 CH_mbi_596 2 5 0.000485625
Physcomitrium patens Chr01 2 CH_ppa_258 2 2 0.000367636
Sequoiadendron giganteum chr10 2 CH_sgi_1142 2 2 0.000146145
Utricularia gibba unitig_744 2 CH_ugi_300 2 2 0.000734592
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_339 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001