Functional clusters

Information

  • Type MapMan
  • Description Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN carboxylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 1 CH_acertr_346 2 2 0.000070497
Actinidia chinensis Lachesis_group22 1 CH_ach_95 2 2 0.0000543213
Ceratophyllum demersum 3 1 CH_cde_196 2 2 0.000236939
Carica papaya supercontig_162 1 CH_cpa_235 2 2 0.0000950661
Daucus carota DCARv2_Chr9 1 CH_dca_322 2 2 0.000191333
Fragaria x ananassa Fvb6-2 1 CH_fan_635 2 2 0.000832663
Lupinus albus Lalb_Chr06 1 CH_lal_22 5 6 0.0000000000000071701
Salix brachista GWHAAZH00000019 1 CH_sbr_13 7 10 2.13033e-20
Sequoiadendron giganteum chr4 1 CH_sgi_446 3 4 0.000000014239
Sapria himalayana scaffold2_22354274 1 CH_shi_120 2 2 0.0000571804
Trochodendron aralioides group17 1 CH_tar_320 2 3 0.000180104
Acer truncatum chr2 2 CH_acertr_346 2 2 0.000070497
Actinidia chinensis Lachesis_group22 2 CH_ach_95 2 2 0.0000543213
Ceratophyllum demersum 3 2 CH_cde_196 2 2 0.000236939
Carica papaya supercontig_162 2 CH_cpa_235 2 2 0.0000950661
Daucus carota DCARv2_Chr9 2 CH_dca_322 2 2 0.000191333
Fragaria x ananassa Fvb6-2 2 CH_fan_635 2 2 0.000832663
Lupinus albus Lalb_Chr06 2 CH_lal_22 5 6 0.0000000000000071701
Salix brachista GWHAAZH00000019 2 CH_sbr_13 7 10 2.13033e-20
Sequoiadendron giganteum chr4 2 CH_sgi_446 3 4 0.000000014239
Sapria himalayana scaffold2_22354274 2 CH_shi_120 2 2 0.0000571804
Trochodendron aralioides group17 2 CH_tar_320 2 3 0.000180104

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001