Functional clusters

Information

  • Type MapMan
  • Description Enzyme classification.EC_6 ligases.EC_6.3 ligase forming carbon-nitrogen bond

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Chara braunii BFEA01000381 1 CH_cbr_10 6 27 0.000000000236086
Chara braunii BFEA01000031 1 CH_cbr_38 4 14 0.0000034048
Davidia involucrata GWHABJS00000015 1 CH_din_270 2 2 0.0000500125
Fragaria x ananassa Fvb7-1 1 CH_fan_443 2 2 0.000185036
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_500 2 2 0.0000398653
Sapria himalayana scaffold5_19632047 1 CH_shi_201 2 4 0.000343063
Vanilla planifolia CM028153.1 1 CH_vpl_207 2 2 0.000073888
Chara braunii BFEA01000381 2 CH_cbr_10 6 27 0.000000000236086
Chara braunii BFEA01000031 2 CH_cbr_38 4 14 0.0000034048
Davidia involucrata GWHABJS00000015 2 CH_din_270 2 2 0.0000500125
Eucalyptus grandis Chr10 2 CH_egr_419 3 5 0.0000000513804
Fragaria x ananassa Fvb7-1 2 CH_fan_443 2 2 0.000185036
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_500 2 2 0.0000398653
Sapria himalayana scaffold5_19632047 2 CH_shi_201 2 4 0.000343063
Vanilla planifolia CM028153.1 2 CH_vpl_207 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001