Functional clusters
Information
- Type MapMan
- Description Enzyme classification.EC_5 isomerases.EC_5.4 intramolecular transferase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-1 | 1 | CH_aar_279 | 2 | 2 | 0.000912326 |
Actinidia chinensis | Lachesis_group7 | 1 | CH_ach_48 | 3 | 3 | 0.00000097379 |
Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 1 | CH_bvu_63 | 4 | 7 | 0.00000000416942 |
Cannabis sativa | NC_044376.1 | 1 | CH_cansat_49 | 5 | 16 | 0.00000000000365265 |
Ceratophyllum demersum | 5 | 1 | CH_cde_128 | 3 | 16 | 0.000104624 |
Chenopodium quinoa | C_Quinoa_Scaffold_1611 | 1 | CH_cqu_46 | 5 | 5 | 0.0000000000000486587 |
Chenopodium quinoa | C_Quinoa_Scaffold_2081 | 1 | CH_cqu_79 | 4 | 4 | 0.000000000228193 |
Daucus carota | DCARv2_Chr8 | 1 | CH_dca_445 | 2 | 2 | 0.000637775 |
Davidia involucrata | GWHABJS00000013 | 1 | CH_din_480 | 2 | 2 | 0.000500125 |
Lotus japonicus | chr1 | 1 | CH_lja_131 | 3 | 3 | 0.000000153406 |
Physcomitrium patens | Chr17 | 1 | CH_ppa_344 | 2 | 2 | 0.000919089 |
Pisum sativum | chr3LG5 | 1 | CH_psa_345 | 2 | 2 | 0.000312981 |
Phaseolus vulgaris | Chr08 | 1 | CH_pvu_368 | 2 | 2 | 0.000220418 |
Selenicereus undatus | Scaffold_2055 | 1 | CH_sun_6 | 6 | 14 | 0.000000000000683583 |
Utricularia gibba | unitig_26 | 1 | CH_ugi_302 | 2 | 2 | 0.000734592 |
Vigna mungo | CM024070.1 | 1 | CH_vmu_311 | 2 | 2 | 0.000193842 |
Aethionema arabicum | LG-1 | 2 | CH_aar_279 | 2 | 2 | 0.000912326 |
Actinidia chinensis | Lachesis_group7 | 2 | CH_ach_48 | 3 | 3 | 0.00000097379 |
Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 2 | CH_bvu_63 | 4 | 7 | 0.00000000416942 |
Cannabis sativa | NC_044376.1 | 2 | CH_cansat_49 | 5 | 16 | 0.00000000000365265 |
Ceratophyllum demersum | 5 | 2 | CH_cde_128 | 3 | 16 | 0.000104624 |
Chenopodium quinoa | C_Quinoa_Scaffold_1611 | 2 | CH_cqu_46 | 5 | 5 | 0.0000000000000486587 |
Chenopodium quinoa | C_Quinoa_Scaffold_2081 | 2 | CH_cqu_79 | 4 | 4 | 0.000000000228193 |
Daucus carota | DCARv2_Chr8 | 2 | CH_dca_445 | 2 | 2 | 0.000637775 |
Davidia involucrata | GWHABJS00000013 | 2 | CH_din_480 | 2 | 2 | 0.000500125 |
Lotus japonicus | chr1 | 2 | CH_lja_131 | 3 | 3 | 0.000000153406 |
Physcomitrium patens | Chr17 | 2 | CH_ppa_344 | 2 | 2 | 0.000919089 |
Pisum sativum | chr3LG5 | 2 | CH_psa_345 | 2 | 2 | 0.000312981 |
Phaseolus vulgaris | Chr08 | 2 | CH_pvu_368 | 2 | 2 | 0.000220418 |
Selenicereus undatus | Scaffold_2055 | 2 | CH_sun_6 | 6 | 14 | 0.000000000000683583 |
Utricularia gibba | unitig_26 | 2 | CH_ugi_302 | 2 | 2 | 0.000734592 |
Vigna mungo | CM024070.1 | 2 | CH_vmu_311 | 2 | 2 | 0.000193842 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |