Functional clusters

Information

  • Type MapMan
  • Description Enzyme classification.EC_1 oxidoreductases.EC_1.4 oxidoreductase acting on CH-NH2 group of donor

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group13 1 CH_ach_55 3 4 0.00000148702
Avicennia marina ScioBoG_3703_HRSCAF_3719 1 CH_ama_148 2 2 0.000862218
Capsicum annuum PGAv.1.6.scaffold853 1 CH_can_437 2 3 0.000743443
Erythranthe guttata scaffold_9 1 CH_egut_384 2 2 0.000218444
Salvia bowleyana GWHASIU00000003 1 CH_sbo_386 2 2 0.000272988
Simmondsia chinensis GWHAASQ00000001 1 CH_sci_237 2 2 0.000255428
Solanum lycopersicum SL4.0ch03 1 CH_sly_529 2 2 0.000586941
Solanum pennellii Spenn-ch03 1 CH_spe_488 2 2 0.00044479
Solanum tuberosum ST4.03ch03 1 CH_stu_480 2 2 0.000153736
Actinidia chinensis Lachesis_group13 2 CH_ach_55 3 4 0.00000148702
Avicennia marina ScioBoG_3703_HRSCAF_3719 2 CH_ama_148 2 2 0.000862218
Capsicum annuum PGAv.1.6.scaffold853 2 CH_can_437 2 3 0.000743443
Erythranthe guttata scaffold_9 2 CH_egut_384 2 2 0.000218444
Salvia bowleyana GWHASIU00000003 2 CH_sbo_386 2 2 0.000272988
Simmondsia chinensis GWHAASQ00000001 2 CH_sci_237 2 2 0.000255428
Solanum lycopersicum SL4.0ch03 2 CH_sly_529 2 2 0.000586941
Solanum pennellii Spenn-ch03 2 CH_spe_488 2 2 0.00044479
Solanum tuberosum ST4.03ch03 2 CH_stu_480 2 2 0.000153736

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001