Functional clusters
Information
- Type MapMan
- Description Lipid metabolism.lipid degradation.sphingolipid degradation.ceramidase activities.alkaline ceramidase (TOD1)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr10 | 1 | CH_acertr_315 | 2 | 2 | 0.000070497 |
Citrus clementina | scaffold_2 | 1 | CH_ccl_309 | 2 | 2 | 0.0000820311 |
Magnolia biondii | Chr07 | 1 | CH_mbi_512 | 2 | 4 | 0.000291382 |
Olea europaea | chr7 | 1 | CH_oeu_423 | 2 | 3 | 0.00096076 |
Sequoiadendron giganteum | chr5 | 1 | CH_sgi_1031 | 2 | 3 | 0.000146142 |
Acer truncatum | chr10 | 2 | CH_acertr_315 | 2 | 2 | 0.000070497 |
Citrus clementina | scaffold_2 | 2 | CH_ccl_309 | 2 | 2 | 0.0000820311 |
Magnolia biondii | Chr07 | 2 | CH_mbi_512 | 2 | 4 | 0.000291382 |
Olea europaea | chr7 | 2 | CH_oeu_423 | 2 | 3 | 0.00096076 |
Sequoiadendron giganteum | chr5 | 2 | CH_sgi_1031 | 2 | 3 | 0.000146142 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |