Functional clusters
Information
- Type MapMan
- Description Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.acetate-malate shunt.peroxisomal acetyl-CoA synthetase (ACN/BZU)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Camellia sinensis var. sinensis | Chr9 | 1 | CH_camsi_897 | 2 | 4 | 0.000825322 |
Citrus clementina | scaffold_9 | 1 | CH_ccl_128 | 3 | 4 | 0.0000000403746 |
Gossypium hirsutum | A02 | 1 | CH_ghi_234 | 3 | 3 | 0.0000000898358 |
Gossypium raimondii | Chr05 | 1 | CH_gra_342 | 2 | 2 | 0.000321664 |
Manihot esculenta | Chromosome15 | 1 | CH_mes_282 | 2 | 2 | 0.0000610631 |
Oryza sativa ssp. japonica | chr03 | 1 | CH_osa_253 | 2 | 4 | 0.000158433 |
Petunia axillaris | Peaxi162Scf00017 | 1 | CH_pax_156 | 3 | 12 | 0.0000163224 |
Tarenaya hassleriana | NW_010966178.1 | 1 | CH_tha_134 | 2 | 2 | 0.000209541 |
Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_311 | 2 | 2 | 0.000278772 |
Camellia sinensis var. sinensis | Chr9 | 2 | CH_camsi_897 | 2 | 4 | 0.000825322 |
Citrus clementina | scaffold_9 | 2 | CH_ccl_128 | 3 | 4 | 0.0000000403746 |
Eucalyptus grandis | Chr01 | 2 | CH_egr_448 | 3 | 6 | 0.000000102758 |
Gossypium hirsutum | A02 | 2 | CH_ghi_234 | 3 | 3 | 0.0000000898358 |
Gossypium hirsutum | D02 | 2 | CH_ghi_886 | 2 | 2 | 0.000961256 |
Gossypium raimondii | Chr05 | 2 | CH_gra_342 | 2 | 2 | 0.000321664 |
Manihot esculenta | Chromosome15 | 2 | CH_mes_282 | 2 | 2 | 0.0000610631 |
Oryza sativa ssp. japonica | chr03 | 2 | CH_osa_253 | 2 | 4 | 0.000158433 |
Petunia axillaris | Peaxi162Scf00017 | 2 | CH_pax_156 | 3 | 12 | 0.0000163224 |
Tarenaya hassleriana | NW_010966178.1 | 2 | CH_tha_134 | 2 | 2 | 0.000209541 |
Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_311 | 2 | 2 | 0.000278772 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |