Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.aconitase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr5 1 CH_camsi_108 6 40 0.0000000000161252
Gossypium raimondii Chr09 1 CH_gra_232 3 12 0.000053054
Helianthus annuus HanXRQChr04 1 CH_han_643 2 2 0.000386429
Salix brachista GWHAAZH00000007 1 CH_sbr_143 3 3 0.00000131039
Simmondsia chinensis GWHAASQ00000021 1 CH_sci_37 4 12 0.00000000458064
Theobroma cacao Chromosome_7 1 CH_tca_198 4 34 0.000000817584
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_412 2 2 0.000756974
Vanilla planifolia CM028160.1 1 CH_vpl_85 4 66 0.00000434345
Camellia sinensis var. sinensis Chr5 2 CH_camsi_108 6 40 0.0000000000161252
Gossypium hirsutum D05 2 CH_ghi_510 3 11 0.000080205
Gossypium raimondii Chr09 2 CH_gra_232 3 12 0.000053054
Helianthus annuus HanXRQChr04 2 CH_han_643 2 2 0.000386429
Salix brachista GWHAAZH00000007 2 CH_sbr_143 3 3 0.00000131039
Simmondsia chinensis GWHAASQ00000021 2 CH_sci_37 4 12 0.00000000458064
Theobroma cacao Chromosome_7 2 CH_tca_198 4 34 0.000000817584
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_412 2 2 0.000756974
Vanilla planifolia CM028160.1 2 CH_vpl_85 4 66 0.00000434345

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001