Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.multifunctional enzyme (MFP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR07 1 CH_aox_226 2 2 0.000240597
Amborella trichopoda AmTr_v1.0_scaffold00109 1 CH_atr_256 2 2 0.000238322
Carpinus fangiana Cfa06 1 CH_cfa_305 2 2 0.000227204
Carya illinoinensis Chr02 1 CH_cil_557 2 2 0.000929742
Carya illinoinensis Chr01 1 CH_cil_558 2 2 0.000929742
Corchorus olitorius AWUE01022448.1 1 CH_col_117 2 2 0.000876296
Cucumis sativus L. chr6 1 CH_csa_169 4 77 0.0000123783
Durio zibethinus NW_019168159.1 1 CH_dzi_361 2 2 0.000695233
Glycine max Gm17 1 CH_gma_512 2 2 0.000379557
Malus domestica Chr02 1 CH_mdo_645 2 2 0.000379212
Petunia axillaris Peaxi162Scf00034 1 CH_pax_110 3 4 0.000000593943
Phaseolus vulgaris Chr03 1 CH_pvu_359 2 2 0.000220418
Solanum pennellii Spenn-ch08 1 CH_spe_565 2 2 0.00093406
Theobroma cacao Chromosome_9 1 CH_tca_439 2 2 0.000732386
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_429 2 2 0.000929238
Vigna mungo CM024074.1 1 CH_vmu_295 2 2 0.000193842
Zea mays 5 1 CH_zma_254 2 2 0.000511313
Aquilegia oxysepala CHR07 2 CH_aox_226 2 2 0.000240597
Amborella trichopoda AmTr_v1.0_scaffold00109 2 CH_atr_256 2 2 0.000238322
Carpinus fangiana Cfa06 2 CH_cfa_305 2 2 0.000227204
Carya illinoinensis Chr02 2 CH_cil_557 2 2 0.000929742
Carya illinoinensis Chr01 2 CH_cil_558 2 2 0.000929742
Corchorus olitorius AWUE01022448.1 2 CH_col_117 2 2 0.000876296
Cucumis sativus L. chr6 2 CH_csa_169 4 77 0.0000123783
Durio zibethinus NW_019168159.1 2 CH_dzi_361 2 2 0.000695233
Glycine max Gm17 2 CH_gma_512 2 2 0.000379557
Malus domestica Chr02 2 CH_mdo_645 2 2 0.000379212
Petunia axillaris Peaxi162Scf00034 2 CH_pax_110 3 4 0.000000593943
Phaseolus vulgaris Chr03 2 CH_pvu_359 2 2 0.000220418
Solanum pennellii Spenn-ch08 2 CH_spe_565 2 2 0.00093406
Theobroma cacao Chromosome_9 2 CH_tca_439 2 2 0.000732386
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_429 2 2 0.000929238
Vigna mungo CM024074.1 2 CH_vmu_295 2 2 0.000193842
Zea mays 5 2 CH_zma_254 2 2 0.000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001