Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.phospholipase activities.phospholipase D activities.phospholipase D (PLD-beta/gamma)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 1 CH_aly_315 2 2 0.000198013
Arabidopsis thaliana Chr4 1 CH_ath_133 3 5 0.000000123109
Brassica carinata ChrC01 1 CH_bca_303 3 4 0.000000328987
Brassica napus C03 1 CH_bna_282 3 6 0.00000123877
Brassica oleracea C3 1 CH_bol_348 2 2 0.000326861
Brassica rapa A03 1 CH_bra_317 2 2 0.000429314
Carpinus fangiana Cfa05 1 CH_cfa_104 3 4 0.000000137654
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_527 2 2 0.000942317
Eutrema salsugineum scaffold_3 1 CH_esa_306 2 3 0.000685305
Fragaria vesca Fvb5 1 CH_fve_190 3 8 0.00000116579
Helianthus annuus HanXRQChr06 1 CH_han_732 2 2 0.0008115
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_498 2 2 0.000514007
Olea europaea scaffold2101 1 CH_oeu_356 2 3 0.000480389
Papaver somniferum NC_039361.1 1 CH_pso_480 2 2 0.00013514
Papaver somniferum NC_039365.1 1 CH_pso_481 2 2 0.00013514
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_300 3 7 0.0000003337
Rhododendron simsii chr01 1 CH_rsi_495 2 2 0.000387184
Rhododendron simsii chr07 1 CH_rsi_496 2 2 0.000387184
Sechium edule LG04 1 CH_sed_336 2 2 0.000713419
Arabidopsis lyrata scaffold_6 2 CH_aly_315 2 2 0.000198013
Arabidopsis thaliana Chr4 2 CH_ath_133 3 5 0.000000123109
Brassica carinata ChrC01 2 CH_bca_303 3 4 0.000000328987
Brassica oleracea C3 2 CH_bol_348 2 2 0.000326861
Brassica rapa A03 2 CH_bra_317 2 2 0.000429314
Carpinus fangiana Cfa05 2 CH_cfa_104 3 4 0.000000137654
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_527 2 2 0.000942317
Eutrema salsugineum scaffold_3 2 CH_esa_306 2 3 0.000685305
Fragaria vesca Fvb5 2 CH_fve_190 3 8 0.00000116579
Helianthus annuus HanXRQChr06 2 CH_han_732 2 2 0.0008115
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_498 2 2 0.000514007
Olea europaea scaffold2101 2 CH_oeu_356 2 3 0.000480389
Papaver somniferum NC_039361.1 2 CH_pso_480 2 2 0.00013514
Papaver somniferum NC_039365.1 2 CH_pso_481 2 2 0.00013514
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_300 3 7 0.0000003337
Rhododendron simsii chr01 2 CH_rsi_495 2 2 0.000387184
Rhododendron simsii chr07 2 CH_rsi_496 2 2 0.000387184
Sechium edule LG04 2 CH_sed_336 2 2 0.000713419

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001