Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.phospholipase activities.phospholipase D activities.phospholipase D (PLD-alpha)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR01 1 CH_aox_287 2 2 0.000481193
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 1 CH_arhy_746 2 2 0.000838273
Camellia sinensis var. sinensis Chr12 1 CH_camsi_428 3 8 0.00000617912
Camellia sinensis var. sinensis Chr14 1 CH_camsi_979 2 2 0.000962949
Capsicum annuum PGAv.1.6.scaffold98 1 CH_can_446 2 2 0.000826105
Cicer arietinum L. Ca_LG5_v3 1 CH_car_274 2 2 0.000466981
Corylus avellana 11 1 CH_cav_419 2 2 0.000460017
Chara braunii BFEA01000169 1 CH_cbr_20 3 4 0.0000000310409
Coffea canephora chr8 1 CH_ccan_359 2 13 0.000715475
Carpinus fangiana Cfa05 1 CH_cfa_352 2 2 0.000454408
Carya illinoinensis Chr07 1 CH_cil_535 2 2 0.000619828
Durio zibethinus NW_019168159.1 1 CH_dzi_330 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_526 2 2 0.000942317
Eutrema salsugineum scaffold_6 1 CH_esa_278 2 2 0.000456899
Glycine max Gm06 1 CH_gma_561 2 2 0.000569336
Lonicera japonica GWHAAZE00000007 1 CH_lonja_607 2 2 0.000598874
Olea europaea chr23 1 CH_oeu_114 3 9 0.0000071767
Oryza sativa ssp. japonica chr06 1 CH_osa_102 3 3 0.0000000836762
Phaseolus vulgaris Chr05 1 CH_pvu_465 2 2 0.000734727
Phaseolus vulgaris Chr09 1 CH_pvu_466 2 2 0.000734727
Quercus lobata 5 1 CH_qlo_573 3 10 0.00000959057
Sequoiadendron giganteum chr2 1 CH_sgi_477 3 5 0.0000000355966
Solanum lycopersicum SL4.0ch08 1 CH_sly_520 2 2 0.000586941
Solanum pennellii Spenn-ch08 1 CH_spe_482 2 2 0.00044479
Theobroma cacao Chromosome_9 1 CH_tca_396 2 2 0.000439432
Vigna mungo CM024072.1 1 CH_vmu_344 2 2 0.000387685
Aquilegia oxysepala CHR01 2 CH_aox_287 2 2 0.000481193
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 2 CH_arhy_746 2 2 0.000838273
Camellia sinensis var. sinensis Chr12 2 CH_camsi_428 3 8 0.00000617912
Camellia sinensis var. sinensis Chr14 2 CH_camsi_979 2 2 0.000962949
Capsicum annuum PGAv.1.6.scaffold98 2 CH_can_446 2 2 0.000826105
Cicer arietinum L. Ca_LG5_v3 2 CH_car_274 2 2 0.000466981
Corylus avellana 11 2 CH_cav_419 2 2 0.000460017
Chara braunii BFEA01000169 2 CH_cbr_20 3 4 0.0000000310409
Coffea canephora chr8 2 CH_ccan_359 2 13 0.000715475
Carpinus fangiana Cfa05 2 CH_cfa_352 2 2 0.000454408
Carya illinoinensis Chr07 2 CH_cil_535 2 2 0.000619828
Durio zibethinus NW_019168159.1 2 CH_dzi_330 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_526 2 2 0.000942317
Eutrema salsugineum scaffold_6 2 CH_esa_278 2 2 0.000456899
Glycine max Gm06 2 CH_gma_561 2 2 0.000569336
Lonicera japonica GWHAAZE00000007 2 CH_lonja_607 2 2 0.000598874
Olea europaea chr23 2 CH_oeu_114 3 9 0.0000071767
Oryza sativa ssp. japonica chr06 2 CH_osa_102 3 3 0.0000000836762
Phaseolus vulgaris Chr05 2 CH_pvu_465 2 2 0.000734727
Phaseolus vulgaris Chr09 2 CH_pvu_466 2 2 0.000734727
Quercus lobata 5 2 CH_qlo_573 3 10 0.00000959057
Sequoiadendron giganteum chr2 2 CH_sgi_477 3 5 0.0000000355966
Solanum lycopersicum SL4.0ch08 2 CH_sly_520 2 2 0.000586941
Solanum pennellii Spenn-ch08 2 CH_spe_482 2 2 0.00044479
Theobroma cacao Chromosome_9 2 CH_tca_396 2 2 0.000439432
Vigna mungo CM024072.1 2 CH_vmu_344 2 2 0.000387685

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001