Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A2 activities.phospholipase A2 (pPLA2-II)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-6 1 CH_aar_240 2 2 0.000547395
Acer truncatum chr3 1 CH_acertr_314 2 2 0.000070497
Actinidia chinensis Lachesis_group26 1 CH_ach_16 4 4 0.000000000656446
Arabidopsis lyrata scaffold_7 1 CH_aly_129 3 3 0.000000228728
Aquilegia oxysepala CHR06 1 CH_aox_11 9 58 1.27819e-16
Arabidopsis thaliana Chr4 1 CH_ath_95 3 3 0.0000000123118
Amborella trichopoda AmTr_v1.0_scaffold00126 1 CH_atr_20 6 9 4.18651e-17
Brassica carinata Contig886 1 CH_bca_163 3 3 0.00000000685435
Brassica oleracea C1 1 CH_bol_346 2 2 0.000326861
Brassica oleracea C7 1 CH_bol_347 2 2 0.000326861
Brassica rapa A01 1 CH_bra_315 2 2 0.000429314
Brassica rapa A03 1 CH_bra_316 2 2 0.000429314
Beta vulgaris Chr6_EL10_PGA_scaffold0 1 CH_bvu_231 2 2 0.000248375
Camellia sinensis var. sinensis Chr4 1 CH_camsi_153 4 6 0.000000000546595
Cannabis sativa NC_044373.1 1 CH_cansat_11 10 34 1.68257e-22
Capsicum annuum PGAv.1.6.scaffold371 1 CH_can_148 3 3 0.000000358301
Corylus avellana 7 1 CH_cav_31 5 8 0.00000000000365579
Corylus avellana 11 1 CH_cav_380 3 13 0.000301897
Coffea canephora chr10 1 CH_ccan_12 6 78 0.0000000000000551157
Coffea canephora chr8 1 CH_ccan_63 4 37 0.00000000739844
Citrus clementina scaffold_7 1 CH_ccl_363 3 13 0.000241953
Ceratophyllum demersum 3 1 CH_cde_1 8 12 8.9743e-21
Carpinus fangiana Cfa01 1 CH_cfa_397 3 13 0.00089257
Carpinus fangiana Cfa08 1 CH_cfa_45 5 7 0.0000000000103691
Carpinus fangiana Cfa07 1 CH_cfa_84 4 5 0.00000000652094
Cardamine hirsuta Chr7 1 CH_chi_364 2 2 0.000414723
Carya illinoinensis Chr16 1 CH_cil_166 4 4 0.00000000427602
Carya illinoinensis Chr09 1 CH_cil_322 3 4 0.0000306453
Carya illinoinensis Chr15 1 CH_cil_54 9 51 2.72171e-16
Citrullus lanatus CG_Chr02 1 CH_cla_8 6 15 0.00000000000000432966
Cucumis melo chr11 1 CH_cme_28 5 7 0.000000000000174682
Corchorus olitorius AWUE01019240.1 1 CH_col_32 3 3 0.00000128001
Chenopodium quinoa C_Quinoa_Scaffold_3163 1 CH_cqu_237 3 4 0.0000022223
Capsella rubella scaffold_7 1 CH_cru_419 2 2 0.000731154
Cucumis sativus L. chr2 1 CH_csa_5 10 20 1.70149e-26
Daucus carota DCARv2_Chr3 1 CH_dca_13 7 15 2.69863e-17
Davidia involucrata GWHABJS00000014 1 CH_din_173 4 16 0.00000208253
Davidia involucrata GWHABJS00000011 1 CH_din_184 3 3 0.00000306161
Davidia involucrata GWHABJS00000002 1 CH_din_5 9 15 1.34922e-23
Durio zibethinus NW_019167937.1 1 CH_dzi_145 3 4 0.0000028352
Durio zibethinus NW_019167949.1 1 CH_dzi_70 4 8 0.0000000103437
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_239 3 12 0.0000232379
Eucalyptus grandis Chr06 1 CH_egr_8 18 49 1.28104e-40
Eutrema salsugineum scaffold_1 1 CH_esa_250 2 2 0.00022845
Fragaria x ananassa Fvb1-4 1 CH_fan_191 4 17 0.00000092395
Fragaria x ananassa Fvb2-4 1 CH_fan_210 3 3 0.00000168249
Fragaria x ananassa Fvb1-3 1 CH_fan_219 4 20 0.00000187984
Fragaria x ananassa Fvb2-3 1 CH_fan_271 3 4 0.00000672873
Fragaria x ananassa Fvb2-1 1 CH_fan_67 4 4 0.000000000389159
Fragaria vesca Fvb2 1 CH_fve_10 9 18 4.99902e-23
Gossypium hirsutum A05 1 CH_ghi_48 6 6 9.04128e-17
Gossypium hirsutum D05 1 CH_ghi_81 5 5 0.000000000000307806
Glycine max Gm14 1 CH_gma_193 3 3 0.000000475419
Glycine max Gm07 1 CH_gma_233 3 4 0.0000019014
Glycine max Gm17 1 CH_gma_74 4 4 0.0000000000812049
Gossypium raimondii Chr09 1 CH_gra_93 4 6 0.0000000022875
Helianthus annuus HanXRQChr02 1 CH_han_125 5 9 0.0000000000554328
Helianthus annuus HanXRQChr09 1 CH_han_329 3 3 0.00000344952
Helianthus annuus HanXRQChr09 1 CH_han_330 3 3 0.00000344952
Hydrangea macrophylla Hma1.2p1_0982F.1 1 CH_hma_46 4 7 0.0000000474549
Hydrangea macrophylla Hma1.2p1_0337F.1 1 CH_hma_9 6 14 0.000000000000527115
Lonicera japonica GWHAAZE00000007 1 CH_lonja_2 19 26 5.32459e-54
Lactuca sativa Lsat_1_v8_lg_1 1 CH_lsa_140 4 6 0.000000011117
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_174 5 35 0.0000000736667
Lactuca sativa Lsat_1_v8_lg_7 1 CH_lsa_279 3 4 0.00000887499
Magnolia biondii Chr06 1 CH_mbi_32 6 18 0.0000000000000031582
Malus domestica Chr15 1 CH_mdo_22 7 12 2.15451e-17
Malus domestica Chr08 1 CH_mdo_65 6 15 0.000000000000478147
Manihot esculenta Chromosome18 1 CH_mes_88 4 4 0.0000000000239092
Medicago truncatula chr8 1 CH_mtr_123 5 10 0.00000000000135667
Nelumbo nucifera chr5 1 CH_nnu_48 4 6 0.000000000130541
Nicotiana tabacum Nitab4.5_0000310 1 CH_nta_119 3 18 0.000147076
Olea europaea chr5 1 CH_oeu_107 4 39 0.00000470703
Petunia axillaris Peaxi162Scf00964 1 CH_pax_142 3 4 0.00000489938
Punica granatum NC_045133.1 1 CH_pgr_23 5 6 0.000000000000029961
Prunus persica Pp07 1 CH_ppe_150 5 19 0.00000000807178
Prunus persica Pp01 1 CH_ppe_35 7 7 8.73663e-20
Pisum sativum chr2LG1 1 CH_psa_162 3 6 0.00000456975
Papaver somniferum NC_039362.1 1 CH_pso_396 3 6 0.0000269385
Papaver somniferum NC_039360.1 1 CH_pso_414 3 7 0.0000471339
Populus trichocarpa Chr17 1 CH_ptr_16 9 9 2.31072e-25
Populus trichocarpa Chr14 1 CH_ptr_37 7 8 8.13034e-18
Populus trichocarpa Chr19 1 CH_ptr_482 3 8 0.000566642
Phaseolus vulgaris Chr10 1 CH_pvu_44 6 11 0.0000000000000381568
Phaseolus vulgaris Chr01 1 CH_pvu_85 4 4 0.00000000085085
Quercus lobata 10 1 CH_qlo_548 3 3 0.0000045582
Quercus lobata 6 1 CH_qlo_73 7 8 9.24997e-19
Quercus lobata CM012294 1 CH_qlo_90 7 11 3.81196e-17
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_193 5 19 0.0000000025525
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_31 10 43 3.1754e-22
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_371 3 3 0.00000231
Rhododendron simsii chr07 1 CH_rsi_28 8 9 6.47866e-21
Rhododendron simsii chr05 1 CH_rsi_385 3 5 0.000110512
Rhododendron simsii chr06 1 CH_rsi_386 3 5 0.000110512
Rhododendron simsii chr08 1 CH_rsi_84 6 16 0.0000000000202576
Salvia bowleyana GWHASIU00000008 1 CH_sbo_417 2 2 0.00045498
Salix brachista GWHAAZH00000016 1 CH_sbr_155 3 3 0.00000271013
Salix brachista GWHAAZH00000014 1 CH_sbr_16 7 8 2.53867e-19
Simmondsia chinensis GWHAASQ00000015 1 CH_sci_162 2 2 0.0000851426
Sechium edule LG05 1 CH_sed_153 3 9 0.0000128175
Sequoiadendron giganteum chr4 1 CH_sgi_173 6 9 0.0000000000000140599
Sequoiadendron giganteum chr9 1 CH_sgi_29 10 11 1.11356e-29
Solanum lycopersicum SL4.0ch04 1 CH_sly_110 4 5 0.00000000100079
Schrenkiella parvula ch7-6 1 CH_spa_224 2 2 0.000236202
Solanum pennellii Spenn-ch02 1 CH_spe_162 4 14 0.000000264007
Solanum pennellii Spenn-ch08 1 CH_spe_184 3 3 0.00000108022
Solanum pennellii Spenn-ch04 1 CH_spe_70 4 4 0.000000000264272
Solanum tuberosum ST4.03ch08 1 CH_stu_42 6 10 7.71238e-16
Selenicereus undatus Scaffold_33677 1 CH_sun_202 2 2 0.000217992
Trochodendron aralioides group4 1 CH_tar_134 6 75 0.000000133366
Trochodendron aralioides group2 1 CH_tar_167 4 11 0.00000103504
Trochodendron aralioides group11 1 CH_tar_198 3 3 0.0000061637
Theobroma cacao Chromosome_8 1 CH_tca_23 6 6 8.13878e-17
Theobroma cacao Chromosome_5 1 CH_tca_234 3 4 0.00000920191
Tarenaya hassleriana NW_010966177.1 1 CH_tha_7 5 5 0.00000000000000374941
Tripterygium wilfordii NC_052242.1 1 CH_twi_20 5 5 0.0000000000000334793
Tripterygium wilfordii NC_052237.1 1 CH_twi_63 4 5 0.000000000857654
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_124 4 9 0.000000303012
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_77 4 4 0.00000000240989
Vigna mungo CM024073.1 1 CH_vmu_25 5 5 0.00000000000152041
Vigna mungo CM024078.1 1 CH_vmu_7 9 28 2.73349e-19
Vitis vinifera chr7 1 CH_vvi_146 4 5 0.0000000584227
Vitis vinifera chr7 1 CH_vvi_159 4 6 0.00000017516
Vitis vinifera chr18 1 CH_vvi_4 13 17 1.55396e-34
Zea mays 2 1 CH_zma_168 3 9 0.0000723871
Zea mays 1 1 CH_zma_40 4 5 0.000000000992448
Aethionema arabicum LG-6 2 CH_aar_240 2 2 0.000547395
Acer truncatum chr3 2 CH_acertr_314 2 2 0.000070497
Actinidia chinensis Lachesis_group26 2 CH_ach_16 4 4 0.000000000656446
Arabidopsis lyrata scaffold_7 2 CH_aly_129 3 3 0.000000228728
Aquilegia oxysepala CHR06 2 CH_aox_11 9 58 1.27819e-16
Arabidopsis thaliana Chr4 2 CH_ath_95 3 3 0.0000000123118
Amborella trichopoda AmTr_v1.0_scaffold00126 2 CH_atr_20 6 9 4.18651e-17
Brassica carinata Contig886 2 CH_bca_163 3 3 0.00000000685435
Brassica oleracea C1 2 CH_bol_346 2 2 0.000326861
Brassica oleracea C7 2 CH_bol_347 2 2 0.000326861
Brassica rapa A01 2 CH_bra_315 2 2 0.000429314
Brassica rapa A03 2 CH_bra_316 2 2 0.000429314
Beta vulgaris Chr6_EL10_PGA_scaffold0 2 CH_bvu_231 2 2 0.000248375
Camellia sinensis var. sinensis Chr4 2 CH_camsi_153 4 6 0.000000000546595
Cannabis sativa NC_044373.1 2 CH_cansat_11 10 34 1.68257e-22
Capsicum annuum PGAv.1.6.scaffold371 2 CH_can_148 3 3 0.000000358301
Corylus avellana 7 2 CH_cav_31 5 8 0.00000000000365579
Corylus avellana 11 2 CH_cav_380 3 13 0.000301897
Coffea canephora chr10 2 CH_ccan_12 6 78 0.0000000000000551157
Coffea canephora chr8 2 CH_ccan_63 4 37 0.00000000739844
Citrus clementina scaffold_7 2 CH_ccl_363 3 13 0.000241953
Ceratophyllum demersum 3 2 CH_cde_1 8 12 8.9743e-21
Carpinus fangiana Cfa01 2 CH_cfa_397 3 13 0.00089257
Carpinus fangiana Cfa08 2 CH_cfa_45 5 7 0.0000000000103691
Carpinus fangiana Cfa07 2 CH_cfa_84 4 5 0.00000000652094
Cardamine hirsuta Chr7 2 CH_chi_364 2 2 0.000414723
Carya illinoinensis Chr16 2 CH_cil_166 4 4 0.00000000427602
Carya illinoinensis Chr09 2 CH_cil_322 3 4 0.0000306453
Carya illinoinensis Chr15 2 CH_cil_54 9 51 2.72171e-16
Citrullus lanatus CG_Chr02 2 CH_cla_8 6 15 0.00000000000000432966
Cucumis melo chr11 2 CH_cme_28 5 7 0.000000000000174682
Corchorus olitorius AWUE01019240.1 2 CH_col_32 3 3 0.00000128001
Chenopodium quinoa C_Quinoa_Scaffold_3163 2 CH_cqu_237 3 4 0.0000022223
Capsella rubella scaffold_7 2 CH_cru_419 2 2 0.000731154
Cucumis sativus L. chr2 2 CH_csa_5 10 20 1.70149e-26
Daucus carota DCARv2_Chr3 2 CH_dca_13 7 15 2.69863e-17
Davidia involucrata GWHABJS00000014 2 CH_din_173 4 16 0.00000208253
Davidia involucrata GWHABJS00000011 2 CH_din_184 3 3 0.00000306161
Davidia involucrata GWHABJS00000002 2 CH_din_5 9 15 1.34922e-23
Durio zibethinus NW_019167937.1 2 CH_dzi_145 3 4 0.0000028352
Durio zibethinus NW_019167949.1 2 CH_dzi_70 4 8 0.0000000103437
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_239 3 12 0.0000232379
Eucalyptus grandis Chr09 2 CH_egr_490 5 22 0.000000389417
Eucalyptus grandis Chr06 2 CH_egr_8 18 49 1.28104e-40
Eutrema salsugineum scaffold_1 2 CH_esa_250 2 2 0.00022845
Fragaria x ananassa Fvb1-4 2 CH_fan_191 4 17 0.00000092395
Fragaria x ananassa Fvb2-4 2 CH_fan_210 3 3 0.00000168249
Fragaria x ananassa Fvb1-3 2 CH_fan_219 4 20 0.00000187984
Fragaria x ananassa Fvb2-3 2 CH_fan_271 3 4 0.00000672873
Fragaria x ananassa Fvb2-1 2 CH_fan_67 4 4 0.000000000389159
Fragaria vesca Fvb2 2 CH_fve_10 9 18 4.99902e-23
Gossypium hirsutum A05 2 CH_ghi_48 6 6 9.04128e-17
Gossypium hirsutum D05 2 CH_ghi_81 5 5 0.000000000000307806
Glycine max Gm14 2 CH_gma_193 3 3 0.000000475419
Glycine max Gm07 2 CH_gma_233 3 4 0.0000019014
Glycine max Gm17 2 CH_gma_74 4 4 0.0000000000812049
Gossypium raimondii Chr09 2 CH_gra_93 4 6 0.0000000022875
Helianthus annuus HanXRQChr02 2 CH_han_125 5 9 0.0000000000554328
Helianthus annuus HanXRQChr09 2 CH_han_329 3 3 0.00000344952
Helianthus annuus HanXRQChr09 2 CH_han_330 3 3 0.00000344952
Hydrangea macrophylla Hma1.2p1_0982F.1 2 CH_hma_46 4 7 0.0000000474549
Hydrangea macrophylla Hma1.2p1_0337F.1 2 CH_hma_9 6 14 0.000000000000527115
Lonicera japonica GWHAAZE00000007 2 CH_lonja_2 19 26 5.32459e-54
Lactuca sativa Lsat_1_v8_lg_1 2 CH_lsa_140 4 6 0.000000011117
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_174 5 35 0.0000000736667
Lactuca sativa Lsat_1_v8_lg_7 2 CH_lsa_279 3 4 0.00000887499
Magnolia biondii Chr06 2 CH_mbi_32 6 18 0.0000000000000031582
Malus domestica Chr15 2 CH_mdo_22 7 12 2.15451e-17
Malus domestica Chr08 2 CH_mdo_65 6 15 0.000000000000478147
Manihot esculenta Chromosome18 2 CH_mes_88 4 4 0.0000000000239092
Nelumbo nucifera chr5 2 CH_nnu_48 4 6 0.000000000130541
Nicotiana tabacum Nitab4.5_0000310 2 CH_nta_119 3 18 0.000147076
Olea europaea chr5 2 CH_oeu_107 4 39 0.00000470703
Petunia axillaris Peaxi162Scf00964 2 CH_pax_142 3 4 0.00000489938
Punica granatum NC_045133.1 2 CH_pgr_23 5 6 0.000000000000029961
Prunus persica Pp07 2 CH_ppe_150 5 19 0.00000000807178
Prunus persica Pp01 2 CH_ppe_35 7 7 8.73663e-20
Pisum sativum chr2LG1 2 CH_psa_162 3 6 0.00000456975
Papaver somniferum NC_039362.1 2 CH_pso_396 3 6 0.0000269385
Papaver somniferum NC_039360.1 2 CH_pso_414 3 7 0.0000471339
Populus trichocarpa Chr17 2 CH_ptr_16 9 9 2.31072e-25
Populus trichocarpa Chr14 2 CH_ptr_37 7 8 8.13034e-18
Populus trichocarpa Chr19 2 CH_ptr_482 3 8 0.000566642
Phaseolus vulgaris Chr10 2 CH_pvu_44 6 11 0.0000000000000381568
Phaseolus vulgaris Chr01 2 CH_pvu_85 4 4 0.00000000085085
Quercus lobata 10 2 CH_qlo_548 3 3 0.0000045582
Quercus lobata 6 2 CH_qlo_73 7 8 9.24997e-19
Quercus lobata CM012294 2 CH_qlo_90 7 11 3.81196e-17
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_193 5 19 0.0000000025525
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_31 10 43 3.1754e-22
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_371 3 3 0.00000231
Rhododendron simsii chr07 2 CH_rsi_28 8 9 6.47866e-21
Rhododendron simsii chr05 2 CH_rsi_385 3 5 0.000110512
Rhododendron simsii chr06 2 CH_rsi_386 3 5 0.000110512
Rhododendron simsii chr08 2 CH_rsi_84 6 16 0.0000000000202576
Salvia bowleyana GWHASIU00000008 2 CH_sbo_417 2 2 0.00045498
Salix brachista GWHAAZH00000016 2 CH_sbr_155 3 3 0.00000271013
Salix brachista GWHAAZH00000014 2 CH_sbr_16 7 8 2.53867e-19
Simmondsia chinensis GWHAASQ00000015 2 CH_sci_162 2 2 0.0000851426
Sechium edule LG05 2 CH_sed_153 3 9 0.0000128175
Sequoiadendron giganteum chr4 2 CH_sgi_173 6 9 0.0000000000000140599
Sequoiadendron giganteum chr9 2 CH_sgi_29 10 11 1.11356e-29
Solanum lycopersicum SL4.0ch04 2 CH_sly_110 4 5 0.00000000100079
Schrenkiella parvula ch7-6 2 CH_spa_224 2 2 0.000236202
Solanum pennellii Spenn-ch02 2 CH_spe_162 4 14 0.000000264007
Solanum pennellii Spenn-ch08 2 CH_spe_184 3 3 0.00000108022
Solanum pennellii Spenn-ch04 2 CH_spe_70 4 4 0.000000000264272
Solanum tuberosum ST4.03ch08 2 CH_stu_42 6 10 7.71238e-16
Selenicereus undatus Scaffold_33677 2 CH_sun_202 2 2 0.000217992
Trochodendron aralioides group4 2 CH_tar_134 6 75 0.000000133366
Trochodendron aralioides group2 2 CH_tar_167 4 11 0.00000103504
Trochodendron aralioides group11 2 CH_tar_198 3 3 0.0000061637
Theobroma cacao Chromosome_8 2 CH_tca_23 6 6 8.13878e-17
Theobroma cacao Chromosome_5 2 CH_tca_234 3 4 0.00000920191
Tarenaya hassleriana NW_010966177.1 2 CH_tha_7 5 5 0.00000000000000374941
Tripterygium wilfordii NC_052242.1 2 CH_twi_20 5 5 0.0000000000000334793
Tripterygium wilfordii NC_052237.1 2 CH_twi_63 4 5 0.000000000857654
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_124 4 9 0.000000303012
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_77 4 4 0.00000000240989
Vigna mungo CM024073.1 2 CH_vmu_25 5 5 0.00000000000152041
Vigna mungo CM024078.1 2 CH_vmu_7 9 28 2.73349e-19
Vitis vinifera chr7 2 CH_vvi_146 4 5 0.0000000584227
Vitis vinifera chr7 2 CH_vvi_159 4 6 0.00000017516
Vitis vinifera chr18 2 CH_vvi_4 13 17 1.55396e-34
Zea mays 2 2 CH_zma_168 3 9 0.0000723871
Zea mays 1 2 CH_zma_40 4 5 0.000000000992448

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001