Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.triacylglycerol lipase activities.diacyl-/triacylglycerol lipase activities.lipase (OBL)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_67 4 6 0.00000000110342
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 1 CH_amhyb_47 3 5 0.000000425082
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 1 CH_arhy_695 2 2 0.000628705
Amborella trichopoda AmTr_v1.0_scaffold00131 1 CH_atr_317 2 3 0.000714919
Capsicum annuum PGAv.1.6.scaffold660 1 CH_can_147 3 3 0.000000358301
Cicer arietinum L. Ca_LG4_v3 1 CH_car_193 3 22 0.000139676
Corylus avellana 7 1 CH_cav_22 5 6 0.0000000000000870828
Citrus clementina scaffold_7 1 CH_ccl_485 2 2 0.000820311
Citrus clementina scaffold_7 1 CH_ccl_486 2 2 0.000820311
Carpinus fangiana Cfa07 1 CH_cfa_351 2 2 0.000454408
Cucumis melo chr08 1 CH_cme_115 3 4 0.00000149514
Cucumis sativus L. chr6 1 CH_csa_133 3 3 0.000000878034
Cucumis sativus L. chr4 1 CH_csa_62 4 4 0.000000000219902
Durio zibethinus NW_019167960.1 1 CH_dzi_19 5 5 0.00000000000000436163
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_116 3 3 0.0000000302034
Eucalyptus grandis Chr08 1 CH_egr_9 15 35 1.17111e-39
Erythranthe guttata scaffold_8 1 CH_egut_434 2 2 0.000436888
Eutrema salsugineum scaffold_7 1 CH_esa_325 2 2 0.000761499
Fragaria x ananassa Fvb1-4 1 CH_fan_192 3 5 0.00000093463
Fragaria vesca Fvb1 1 CH_fve_52 4 4 0.0000000000214683
Gossypium hirsutum A11 1 CH_ghi_41 6 6 1.65743e-17
Gossypium hirsutum D11 1 CH_ghi_42 6 6 1.65743e-17
Glycine max Gm17 1 CH_gma_182 3 4 0.000000302516
Gossypium raimondii Chr07 1 CH_gra_20 6 7 1.46494e-17
Helianthus annuus HanXRQChr04 1 CH_han_237 3 3 0.000000125437
Helianthus annuus HanXRQChr09 1 CH_han_238 3 3 0.000000125437
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_206 3 5 0.000000396264
Magnolia biondii Chr13 1 CH_mbi_80 4 8 0.000000000120266
Manihot esculenta Chromosome11 1 CH_mes_95 4 4 0.000000000143455
Nelumbo nucifera chr1 1 CH_nnu_121 3 4 0.000000638714
Punica granatum NC_045129.1 1 CH_pgr_326 2 2 0.000450214
Physcomitrium patens Chr03 1 CH_ppa_25 3 3 0.0000000563168
Prunus persica Pp07 1 CH_ppe_102 4 5 0.0000000000933985
Papaver somniferum NC_039360.1 1 CH_pso_324 3 6 0.00000251056
Phaseolus vulgaris Chr03 1 CH_pvu_415 2 2 0.000440836
Quercus lobata CM012294 1 CH_qlo_136 5 7 0.0000000000000235006
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_302 3 4 0.00000033372
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_808 2 2 0.00083717
Salvia bowleyana GWHASIU00000003 1 CH_sbo_71 6 62 0.00000000000754829
Simmondsia chinensis GWHAASQ00000002 1 CH_sci_50 3 3 0.0000000434974
Sechium edule LG13 1 CH_sed_31 5 7 0.00000000000188456
Sequoiadendron giganteum chr6 1 CH_sgi_55 8 10 4.15477e-25
Solanum lycopersicum SL4.0ch02 1 CH_sly_165 3 3 0.000000180867
Selaginella moellendorffii scaffold_7 1 CH_smo_8 8 26 1.9493e-16
Selaginella moellendorffii scaffold_17 1 CH_smo_98 3 6 0.000118841
Solanum pennellii Spenn-ch02 1 CH_spe_151 3 3 0.000000103868
Solanum tuberosum ST4.03ch02 1 CH_stu_178 3 3 0.000000137873
Trochodendron aralioides group0 1 CH_tar_36 5 14 0.00000000000409426
Theobroma cacao Chromosome_1 1 CH_tca_90 4 6 0.000000000265148
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_411 2 2 0.000756974
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_426 2 2 0.000929238
Vigna mungo CM024069.1 1 CH_vmu_343 2 2 0.000387685
Vanilla planifolia CM028155.1 1 CH_vpl_325 2 2 0.000443328
Vitis vinifera chr7 1 CH_vvi_174 3 4 0.000000347115
Acer truncatum chr3 2 CH_acertr_67 4 6 0.00000000110342
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 2 CH_amhyb_47 3 5 0.000000425082
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 2 CH_arhy_695 2 2 0.000628705
Amborella trichopoda AmTr_v1.0_scaffold00131 2 CH_atr_317 2 3 0.000714919
Capsicum annuum PGAv.1.6.scaffold660 2 CH_can_147 3 3 0.000000358301
Cicer arietinum L. Ca_LG4_v3 2 CH_car_193 3 22 0.000139676
Corylus avellana 7 2 CH_cav_22 5 6 0.0000000000000870828
Citrus clementina scaffold_7 2 CH_ccl_485 2 2 0.000820311
Citrus clementina scaffold_7 2 CH_ccl_486 2 2 0.000820311
Carpinus fangiana Cfa07 2 CH_cfa_351 2 2 0.000454408
Cucumis melo chr08 2 CH_cme_115 3 4 0.00000149514
Cucumis sativus L. chr6 2 CH_csa_133 3 3 0.000000878034
Cucumis sativus L. chr4 2 CH_csa_62 4 4 0.000000000219902
Durio zibethinus NW_019167960.1 2 CH_dzi_19 5 5 0.00000000000000436163
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_116 3 3 0.0000000302034
Eucalyptus grandis Chr08 2 CH_egr_9 15 35 1.17111e-39
Erythranthe guttata scaffold_8 2 CH_egut_434 2 2 0.000436888
Eutrema salsugineum scaffold_7 2 CH_esa_325 2 2 0.000761499
Fragaria x ananassa Fvb1-4 2 CH_fan_192 3 5 0.00000093463
Fragaria vesca Fvb1 2 CH_fve_52 4 4 0.0000000000214683
Gossypium hirsutum A11 2 CH_ghi_41 6 6 1.65743e-17
Gossypium hirsutum D11 2 CH_ghi_42 6 6 1.65743e-17
Glycine max Gm17 2 CH_gma_182 3 4 0.000000302516
Gossypium raimondii Chr07 2 CH_gra_20 6 7 1.46494e-17
Helianthus annuus HanXRQChr04 2 CH_han_237 3 3 0.000000125437
Helianthus annuus HanXRQChr09 2 CH_han_238 3 3 0.000000125437
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_206 3 5 0.000000396264
Magnolia biondii Chr13 2 CH_mbi_80 4 8 0.000000000120266
Manihot esculenta Chromosome11 2 CH_mes_95 4 4 0.000000000143455
Nelumbo nucifera chr1 2 CH_nnu_121 3 4 0.000000638714
Punica granatum NC_045129.1 2 CH_pgr_326 2 2 0.000450214
Physcomitrium patens Chr03 2 CH_ppa_25 3 3 0.0000000563168
Prunus persica Pp07 2 CH_ppe_102 4 5 0.0000000000933985
Papaver somniferum NC_039360.1 2 CH_pso_324 3 6 0.00000251056
Phaseolus vulgaris Chr03 2 CH_pvu_415 2 2 0.000440836
Quercus lobata CM012294 2 CH_qlo_136 5 7 0.0000000000000235006
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_302 3 4 0.00000033372
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_808 2 2 0.00083717
Salvia bowleyana GWHASIU00000003 2 CH_sbo_71 6 62 0.00000000000754829
Simmondsia chinensis GWHAASQ00000002 2 CH_sci_50 3 3 0.0000000434974
Sechium edule LG13 2 CH_sed_31 5 7 0.00000000000188456
Sequoiadendron giganteum chr6 2 CH_sgi_55 8 10 4.15477e-25
Solanum lycopersicum SL4.0ch02 2 CH_sly_165 3 3 0.000000180867
Selaginella moellendorffii scaffold_7 2 CH_smo_8 8 26 1.9493e-16
Selaginella moellendorffii scaffold_17 2 CH_smo_98 3 6 0.000118841
Solanum pennellii Spenn-ch02 2 CH_spe_151 3 3 0.000000103868
Solanum tuberosum ST4.03ch02 2 CH_stu_178 3 3 0.000000137873
Trochodendron aralioides group0 2 CH_tar_36 5 14 0.00000000000409426
Theobroma cacao Chromosome_1 2 CH_tca_90 4 6 0.000000000265148
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_411 2 2 0.000756974
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_426 2 2 0.000929238
Vigna mungo CM024069.1 2 CH_vmu_343 2 2 0.000387685
Vanilla planifolia CM028155.1 2 CH_vpl_325 2 2 0.000443328
Vitis vinifera chr7 2 CH_vvi_174 3 4 0.000000347115

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001