Functional clusters
Information
- Type MapMan
- Description Lipid metabolism.lipid degradation.triacylglycerol lipase activities.monoacylglycerol lipase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-5 | 1 | CH_aar_117 | 3 | 6 | 0.0000209601 |
| Arabidopsis lyrata | scaffold_4 | 1 | CH_aly_177 | 3 | 4 | 0.0000031362 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_10 | 1 | CH_amhyb_273 | 2 | 2 | 0.000841751 |
| Aquilegia oxysepala | CHR03 | 1 | CH_aox_304 | 2 | 2 | 0.000481193 |
| Arabidopsis thaliana | Chr2 | 1 | CH_ath_158 | 3 | 4 | 0.000000590914 |
| Brassica carinata | ChrC02 | 1 | CH_bca_377 | 3 | 3 | 0.0000015765 |
| Chara braunii | BFEA01000026 | 1 | CH_cbr_144 | 2 | 2 | 0.000719269 |
| Cardamine hirsuta | Chr4 | 1 | CH_chi_148 | 3 | 3 | 0.000000602003 |
| Carica papaya | supercontig_1 | 1 | CH_cpa_354 | 2 | 2 | 0.000570396 |
| Capsella rubella | scaffold_4 | 1 | CH_cru_172 | 3 | 3 | 0.000000962292 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 1 | CH_eca_154 | 3 | 3 | 0.000000253709 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 1 | CH_rch_812 | 2 | 2 | 0.00083717 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_1380 | 2 | 2 | 0.000730727 |
| Schrenkiella parvula | ch4-6 | 1 | CH_spa_117 | 3 | 3 | 0.00000111587 |
| Trochodendron aralioides | group0 | 1 | CH_tar_201 | 3 | 5 | 0.0000089174 |
| Aethionema arabicum | LG-5 | 2 | CH_aar_117 | 3 | 6 | 0.0000209601 |
| Arabidopsis lyrata | scaffold_4 | 2 | CH_aly_177 | 3 | 4 | 0.0000031362 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_10 | 2 | CH_amhyb_273 | 2 | 2 | 0.000841751 |
| Aquilegia oxysepala | CHR03 | 2 | CH_aox_304 | 2 | 2 | 0.000481193 |
| Arabidopsis thaliana | Chr2 | 2 | CH_ath_158 | 3 | 4 | 0.000000590914 |
| Brassica carinata | ChrC02 | 2 | CH_bca_377 | 3 | 3 | 0.0000015765 |
| Chara braunii | BFEA01000026 | 2 | CH_cbr_144 | 2 | 2 | 0.000719269 |
| Cardamine hirsuta | Chr4 | 2 | CH_chi_148 | 3 | 3 | 0.000000602003 |
| Carica papaya | supercontig_1 | 2 | CH_cpa_354 | 2 | 2 | 0.000570396 |
| Capsella rubella | scaffold_4 | 2 | CH_cru_172 | 3 | 3 | 0.000000962292 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 2 | CH_eca_154 | 3 | 3 | 0.000000253709 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 2 | CH_rch_812 | 2 | 2 | 0.00083717 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_1380 | 2 | 2 | 0.000730727 |
| Schrenkiella parvula | ch4-6 | 2 | CH_spa_117 | 3 | 3 | 0.00000111587 |
| Trochodendron aralioides | group0 | 2 | CH_tar_201 | 3 | 5 | 0.0000089174 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |