Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.sphingolipid biosynthesis.sphingoid long-chain base phosphate phosphatase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Davidia involucrata GWHABJS00000015 1 CH_din_376 2 2 0.000150038
Lupinus albus Lalb_Chr20 1 CH_lal_325 2 2 0.000314895
Papaver somniferum NC_039366.1 1 CH_pso_493 2 2 0.00013514
Papaver somniferum NC_039368.1 1 CH_pso_494 2 2 0.00013514
Quercus lobata 7 1 CH_qlo_944 2 3 0.00046464
Rhododendron simsii chr03 1 CH_rsi_419 2 3 0.000193586
Vanilla planifolia CM028159.1 1 CH_vpl_335 2 2 0.000443328
Davidia involucrata GWHABJS00000015 2 CH_din_376 2 2 0.000150038
Lupinus albus Lalb_Chr20 2 CH_lal_325 2 2 0.000314895
Papaver somniferum NC_039366.1 2 CH_pso_493 2 2 0.00013514
Papaver somniferum NC_039368.1 2 CH_pso_494 2 2 0.00013514
Quercus lobata 7 2 CH_qlo_944 2 3 0.00046464
Rhododendron simsii chr03 2 CH_rsi_419 2 3 0.000193586
Vanilla planifolia CM028159.1 2 CH_vpl_335 2 2 0.000443328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001