Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.sphingolipid biosynthesis.sphingosine transfer protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_8 1 CH_aly_62 4 8 0.000000000905573
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 1 CH_arhy_711 3 46 0.000712482
Davidia involucrata GWHABJS00000001 1 CH_din_479 2 2 0.000500125
Malus domestica Chr11 1 CH_mdo_325 3 8 0.0000067615
Papaver somniferum NC_039363.1 1 CH_pso_251 3 3 0.000000125558
Rhododendron simsii chr09 1 CH_rsi_205 3 4 0.000000249841
Trochodendron aralioides group9 1 CH_tar_535 2 2 0.000600366
Vitis vinifera chr11 1 CH_vvi_56 5 7 0.000000000000110714
Arabidopsis lyrata scaffold_8 2 CH_aly_62 4 8 0.000000000905573
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 2 CH_arhy_711 3 46 0.000712482
Davidia involucrata GWHABJS00000001 2 CH_din_479 2 2 0.000500125
Malus domestica Chr11 2 CH_mdo_325 3 8 0.0000067615
Papaver somniferum NC_039363.1 2 CH_pso_251 3 3 0.000000125558
Rhododendron simsii chr09 2 CH_rsi_205 3 4 0.000000249841
Trochodendron aralioides group9 2 CH_tar_535 2 2 0.000600366
Vitis vinifera chr11 2 CH_vvi_56 5 7 0.000000000000110714

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001