Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.sphingolipid biosynthesis.ceramide synthase (LOH)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC01 1 CH_bca_323 3 3 0.000000466096
Citrus clementina scaffold_3 1 CH_ccl_500 2 2 0.000820311
Ceratophyllum demersum 2 1 CH_cde_294 2 2 0.000789796
Chenopodium quinoa C_Quinoa_Scaffold_2646 1 CH_cqu_508 2 2 0.000473821
Davidia involucrata GWHABJS00000006 1 CH_din_516 2 2 0.000750188
Erigeron canadensis Conyza_canadensis_scaffold:4 1 CH_eca_469 2 2 0.000448722
Lonicera japonica GWHAAZE00000006 1 CH_lonja_648 2 2 0.000898311
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_508 2 2 0.000514007
Olea europaea chr3 1 CH_oeu_413 2 2 0.000800683
Quercus lobata 10 1 CH_qlo_419 3 4 0.000000159926
Sequoiadendron giganteum chr10 1 CH_sgi_536 3 4 0.000000142385
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_381 2 2 0.000454184
Brassica carinata ChrC01 2 CH_bca_323 3 3 0.000000466096
Citrus clementina scaffold_3 2 CH_ccl_500 2 2 0.000820311
Ceratophyllum demersum 2 2 CH_cde_294 2 2 0.000789796
Chenopodium quinoa C_Quinoa_Scaffold_2646 2 CH_cqu_508 2 2 0.000473821
Davidia involucrata GWHABJS00000006 2 CH_din_516 2 2 0.000750188
Erigeron canadensis Conyza_canadensis_scaffold:4 2 CH_eca_469 2 2 0.000448722
Lonicera japonica GWHAAZE00000006 2 CH_lonja_648 2 2 0.000898311
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_508 2 2 0.000514007
Olea europaea chr3 2 CH_oeu_413 2 2 0.000800683
Quercus lobata 10 2 CH_qlo_419 3 4 0.000000159926
Sequoiadendron giganteum chr10 2 CH_sgi_536 3 4 0.000000142385
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_381 2 2 0.000454184

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001