Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.glycerolipid biosynthesis.triacylglycerol.acyl-CoA:diacylglycerol acyltransferase activities.acyl-CoA:diacylglycerol acyltransferase (DGAT2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr7 1 CH_ccan_194 2 11 0.0000425888
Carya illinoinensis Chr07 1 CH_cil_358 2 2 0.0000619828
Durio zibethinus NW_019167960.1 1 CH_dzi_231 2 2 0.000139047
Fragaria x ananassa Fvb1-3 1 CH_fan_532 3 66 0.000469139
Gossypium hirsutum A11 1 CH_ghi_59 5 5 9.60822e-16
Gossypium hirsutum D11 1 CH_ghi_60 5 5 9.60822e-16
Glycine max Gm16 1 CH_gma_511 2 2 0.000379557
Gossypium raimondii Chr07 1 CH_gra_71 4 5 0.000000000034669
Helianthus annuus HanXRQChr14 1 CH_han_31 6 8 4.56027e-18
Lonicera japonica GWHAAZE00000004 1 CH_lonja_441 2 3 0.000179657
Lactuca sativa Lsat_1_v8_lg_8 1 CH_lsa_398 2 2 0.000154202
Magnolia biondii Chr04 1 CH_mbi_149 3 4 0.0000000566069
Malus domestica Chr02 1 CH_mdo_475 2 2 0.000113763
Manihot esculenta Chromosome01 1 CH_mes_292 2 2 0.0000610631
Nelumbo nucifera chr6 1 CH_nnu_314 2 3 0.000130802
Punica granatum NC_045132.1 1 CH_pgr_287 2 2 0.000225107
Pisum sativum chr4LG4 1 CH_psa_361 2 3 0.000469451
Phaseolus vulgaris Chr03 1 CH_pvu_358 2 2 0.000220418
Rhododendron simsii chr10 1 CH_rsi_530 2 3 0.000580745
Striga asiatica scaffold132 1 CH_sas_64 2 2 0.0000625371
Simmondsia chinensis GWHAASQ00000007 1 CH_sci_161 2 2 0.0000851426
Sequoiadendron giganteum chr6 1 CH_sgi_870 2 2 0.0000487151
Utricularia gibba unitig_748 1 CH_ugi_164 2 2 0.0000734592
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_100 3 3 0.0000000518115
Vigna mungo CM024069.1 1 CH_vmu_294 2 2 0.000193842
Vitis vinifera chr4 1 CH_vvi_273 2 2 0.000076063
Coffea canephora chr7 2 CH_ccan_194 2 11 0.0000425888
Carya illinoinensis Chr07 2 CH_cil_358 2 2 0.0000619828
Durio zibethinus NW_019167960.1 2 CH_dzi_231 2 2 0.000139047
Eucalyptus grandis Chr10 2 CH_egr_782 2 2 0.000175582
Fragaria x ananassa Fvb1-3 2 CH_fan_532 3 66 0.000469139
Gossypium hirsutum A11 2 CH_ghi_59 5 5 9.60822e-16
Gossypium hirsutum D11 2 CH_ghi_60 5 5 9.60822e-16
Glycine max Gm16 2 CH_gma_511 2 2 0.000379557
Gossypium raimondii Chr07 2 CH_gra_71 4 5 0.000000000034669
Helianthus annuus HanXRQChr14 2 CH_han_31 6 8 4.56027e-18
Lotus japonicus chr4 2 CH_lja_322 2 2 0.000214523
Lonicera japonica GWHAAZE00000004 2 CH_lonja_441 2 3 0.000179657
Lactuca sativa Lsat_1_v8_lg_8 2 CH_lsa_398 2 2 0.000154202
Magnolia biondii Chr04 2 CH_mbi_149 3 4 0.0000000566069
Malus domestica Chr02 2 CH_mdo_475 2 2 0.000113763
Manihot esculenta Chromosome01 2 CH_mes_292 2 2 0.0000610631
Nelumbo nucifera chr6 2 CH_nnu_314 2 3 0.000130802
Punica granatum NC_045132.1 2 CH_pgr_287 2 2 0.000225107
Pisum sativum chr4LG4 2 CH_psa_361 2 3 0.000469451
Phaseolus vulgaris Chr03 2 CH_pvu_358 2 2 0.000220418
Rhododendron simsii chr10 2 CH_rsi_530 2 3 0.000580745
Striga asiatica scaffold132 2 CH_sas_64 2 2 0.0000625371
Simmondsia chinensis GWHAASQ00000007 2 CH_sci_161 2 2 0.0000851426
Sequoiadendron giganteum chr6 2 CH_sgi_870 2 2 0.0000487151
Utricularia gibba unitig_748 2 CH_ugi_164 2 2 0.0000734592
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_100 3 3 0.0000000518115
Vigna mungo CM024069.1 2 CH_vmu_294 2 2 0.000193842
Vitis vinifera chr4 2 CH_vvi_273 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001