Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.glycerolipid biosynthesis.diacylglycerol.phosphatidate phosphatase (LPP-epsilon)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR01 1 CH_aox_303 2 2 0.000481193
Capsicum annuum PGAv.1.6.scaffold53 1 CH_can_411 2 2 0.000495663
Capsicum annuum PGAv.1.6.scaffold358 1 CH_can_412 2 2 0.000495663
Carya illinoinensis Chr01 1 CH_cil_147 4 9 0.000000000449982
Chenopodium quinoa C_Quinoa_Scaffold_2646 1 CH_cqu_451 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2370 1 CH_cqu_452 2 2 0.000284293
Helianthus annuus HanXRQChr16 1 CH_han_521 2 2 0.000115929
Medicago truncatula chr8 1 CH_mtr_540 2 2 0.0000410863
Nelumbo nucifera chr1 1 CH_nnu_395 2 5 0.000435986
Olea europaea chr10 1 CH_oeu_185 2 2 0.0000533789
Petunia axillaris Peaxi162Scf00366 1 CH_pax_267 2 2 0.000211067
Pisum sativum chr4LG4 1 CH_psa_299 2 2 0.00015649
Papaver somniferum NC_039363.1 1 CH_pso_244 3 4 0.000000106529
Papaver somniferum NC_039358.1 1 CH_pso_287 3 6 0.000000532597
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_492 2 2 0.0000398653
Solanum lycopersicum SL4.0ch02 1 CH_sly_429 2 2 0.000176082
Solanum pennellii Spenn-ch02 1 CH_spe_377 2 2 0.000133437
Tripterygium wilfordii NC_052245.1 1 CH_twi_184 2 2 0.0000557507
Aquilegia oxysepala CHR01 2 CH_aox_303 2 2 0.000481193
Capsicum annuum PGAv.1.6.scaffold53 2 CH_can_411 2 2 0.000495663
Capsicum annuum PGAv.1.6.scaffold358 2 CH_can_412 2 2 0.000495663
Carya illinoinensis Chr01 2 CH_cil_147 4 9 0.000000000449982
Chenopodium quinoa C_Quinoa_Scaffold_2646 2 CH_cqu_451 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2370 2 CH_cqu_452 2 2 0.000284293
Helianthus annuus HanXRQChr16 2 CH_han_521 2 2 0.000115929
Nelumbo nucifera chr1 2 CH_nnu_395 2 5 0.000435986
Olea europaea chr10 2 CH_oeu_185 2 2 0.0000533789
Petunia axillaris Peaxi162Scf00366 2 CH_pax_267 2 2 0.000211067
Pisum sativum chr4LG4 2 CH_psa_299 2 2 0.00015649
Papaver somniferum NC_039363.1 2 CH_pso_244 3 4 0.000000106529
Papaver somniferum NC_039358.1 2 CH_pso_287 3 6 0.000000532597
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_492 2 2 0.0000398653
Solanum lycopersicum SL4.0ch02 2 CH_sly_429 2 2 0.000176082
Solanum pennellii Spenn-ch02 2 CH_spe_377 2 2 0.000133437
Tripterygium wilfordii NC_052245.1 2 CH_twi_184 2 2 0.0000557507

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001