Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.glycerolipid biosynthesis.phosphatidate.endoplasmic reticulum phosphatidate biosynthesis.glycerol-3-phosphate acyltransferase (GPAT9)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata Contig324 1 CH_bca_709 2 2 0.000128259
Magnolia biondii Chr02 1 CH_mbi_664 2 4 0.000874119
Phaseolus vulgaris Chr02 1 CH_pvu_124 4 16 0.0000000324498
Trifolium pratense Tp57577_TGAC_v2_LG7 1 CH_tpr_315 2 2 0.000227092
Vigna mungo CM024069.1 1 CH_vmu_293 2 2 0.000193842
Vanilla planifolia CM028154.1 1 CH_vpl_265 2 2 0.000221664
Brassica carinata Contig324 2 CH_bca_709 2 2 0.000128259
Eucalyptus grandis Chr07 2 CH_egr_780 2 2 0.000175582
Magnolia biondii Chr02 2 CH_mbi_664 2 4 0.000874119
Phaseolus vulgaris Chr02 2 CH_pvu_124 4 16 0.0000000324498
Trifolium pratense Tp57577_TGAC_v2_LG7 2 CH_tpr_315 2 2 0.000227092
Vigna mungo CM024069.1 2 CH_vmu_293 2 2 0.000193842
Vanilla planifolia CM028154.1 2 CH_vpl_265 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001