Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.elongation of exogenous fatty acid chains.medium-chain acyl-ACP synthetase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:9 1 CH_eca_115 3 5 0.0000000302021
Fragaria x ananassa Fvb4-3 1 CH_fan_395 2 2 0.000111022
Fragaria vesca Fvb4 1 CH_fve_324 2 3 0.000176725
Lactuca sativa Lsat_1_v8_lg_1 1 CH_lsa_160 3 5 0.0000000396294
Malus domestica Chr04 1 CH_mdo_427 2 3 0.000113761
Medicago truncatula chr3 1 CH_mtr_614 2 2 0.000123259
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_419 3 33 0.0000129988
Erigeron canadensis Conyza_canadensis_scaffold:9 2 CH_eca_115 3 5 0.0000000302021
Fragaria x ananassa Fvb4-3 2 CH_fan_395 2 2 0.000111022
Fragaria vesca Fvb4 2 CH_fve_324 2 3 0.000176725
Lactuca sativa Lsat_1_v8_lg_1 2 CH_lsa_160 3 5 0.0000000396294
Malus domestica Chr04 2 CH_mdo_427 2 3 0.000113761
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_419 3 33 0.0000129988

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001