Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.fatty acid biosynthesis.acetyl-CoA generation.plastidial acetyl-CoA synthetase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr11 1 CH_ccan_181 2 6 0.0000255534
Coffea canephora chr7 1 CH_ccan_253 2 4 0.000153319
Helianthus annuus HanXRQChr07 1 CH_han_195 3 3 0.0000000089598
Manihot esculenta Chromosome04 1 CH_mes_376 2 2 0.000183189
Nelumbo nucifera chr3 1 CH_nnu_391 2 3 0.000392399
Sequoiadendron giganteum chr2 1 CH_sgi_1199 2 4 0.000292277
Tarenaya hassleriana NW_010964923.1 1 CH_tha_156 2 2 0.000209541
Trifolium pratense Tp57577_TGAC_v2_LG6 1 CH_tpr_253 2 2 0.0000756974
Utricularia gibba unitig_736 1 CH_ugi_227 2 2 0.000220378
Coffea canephora chr11 2 CH_ccan_181 2 6 0.0000255534
Coffea canephora chr7 2 CH_ccan_253 2 4 0.000153319
Helianthus annuus HanXRQChr07 2 CH_han_195 3 3 0.0000000089598
Lotus japonicus chr1 2 CH_lja_280 2 2 0.0000715077
Manihot esculenta Chromosome04 2 CH_mes_376 2 2 0.000183189
Nelumbo nucifera chr3 2 CH_nnu_391 2 3 0.000392399
Sequoiadendron giganteum chr2 2 CH_sgi_1199 2 4 0.000292277
Tarenaya hassleriana NW_010964923.1 2 CH_tha_156 2 2 0.000209541
Trifolium pratense Tp57577_TGAC_v2_LG6 2 CH_tpr_253 2 2 0.0000756974
Utricularia gibba unitig_736 2 CH_ugi_227 2 2 0.000220378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001