Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.fatty acid biosynthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E1 pyruvate dehydrogenase subcomplex.subunit beta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Chenopodium quinoa C_Quinoa_Scaffold_1000 1 CH_cqu_487 2 2 0.000473821
Daucus carota DCARv2_Chr1 1 CH_dca_280 2 2 0.000191333
Erigeron canadensis Conyza_canadensis_scaffold:4 1 CH_eca_325 2 3 0.000134614
Rhododendron simsii chr13 1 CH_rsi_329 2 2 0.0000645307
Sequoiadendron giganteum chr5 1 CH_sgi_1073 2 2 0.000146145
Chenopodium quinoa C_Quinoa_Scaffold_1000 2 CH_cqu_487 2 2 0.000473821
Daucus carota DCARv2_Chr1 2 CH_dca_280 2 2 0.000191333
Erigeron canadensis Conyza_canadensis_scaffold:4 2 CH_eca_325 2 3 0.000134614
Gossypium hirsutum D05 2 CH_ghi_769 2 2 0.000560733
Rhododendron simsii chr13 2 CH_rsi_329 2 2 0.0000645307
Sequoiadendron giganteum chr5 2 CH_sgi_1073 2 2 0.000146145

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001