Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.fatty acid biosynthesis.citrate shuttle.MPC pyruvate carrier complex.component MPC2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC09 1 CH_bca_992 2 2 0.00059854
Brassica oleracea C1 1 CH_bol_345 2 2 0.000326861
Capsella rubella scaffold_6 1 CH_cru_327 2 2 0.000219346
Daucus carota DCARv2_Chr1 1 CH_dca_91 3 3 0.0000000244062
Eutrema salsugineum scaffold_3 1 CH_esa_249 2 2 0.00022845
Hydrangea macrophylla Hma1.2p1_0660F.1 1 CH_hma_394 2 2 0.000666519
Magnolia biondii Chr13 1 CH_mbi_462 2 2 0.000145698
Medicago truncatula chr2 1 CH_mtr_524 2 2 0.0000410863
Pisum sativum chr1LG6 1 CH_psa_267 2 3 0.000156486
Quercus lobata 8 1 CH_qlo_809 2 2 0.000154887
Tarenaya hassleriana NW_010965372.1 1 CH_tha_144 2 2 0.000209541
Trifolium pratense Tp57577_TGAC_v2_LG7 1 CH_tpr_232 2 2 0.0000756974
Vitis vinifera chr19 1 CH_vvi_432 2 2 0.00076063
Brassica carinata ChrC09 2 CH_bca_992 2 2 0.00059854
Brassica oleracea C1 2 CH_bol_345 2 2 0.000326861
Capsella rubella scaffold_6 2 CH_cru_327 2 2 0.000219346
Daucus carota DCARv2_Chr1 2 CH_dca_91 3 3 0.0000000244062
Eutrema salsugineum scaffold_3 2 CH_esa_249 2 2 0.00022845
Hydrangea macrophylla Hma1.2p1_0660F.1 2 CH_hma_394 2 2 0.000666519
Magnolia biondii Chr13 2 CH_mbi_462 2 2 0.000145698
Pisum sativum chr1LG6 2 CH_psa_267 2 3 0.000156486
Quercus lobata 8 2 CH_qlo_809 2 2 0.000154887
Tarenaya hassleriana NW_010965372.1 2 CH_tha_144 2 2 0.000209541
Trifolium pratense Tp57577_TGAC_v2_LG7 2 CH_tpr_232 2 2 0.0000756974
Vitis vinifera chr19 2 CH_vvi_432 2 2 0.00076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001