Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.branched-chain amino acid.3-hydroxyisobutyryl-CoA hydrolase (CHY)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 1 CH_aly_139 3 4 0.000000522751
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 1 CH_arhy_292 3 5 0.00000112917
Arabidopsis thaliana Chr2 1 CH_ath_356 2 2 0.000286492
Corylus avellana 1 1 CH_cav_369 2 2 0.000230008
Citrus clementina scaffold_3 1 CH_ccl_494 2 2 0.000820311
Carya illinoinensis Chr14 1 CH_cil_210 3 3 0.0000000576299
Daucus carota DCARv2_S163.1 1 CH_dca_321 2 2 0.000191333
Erigeron canadensis Conyza_canadensis_scaffold:5 1 CH_eca_465 2 2 0.000448722
Helianthus annuus HanXRQChr06 1 CH_han_179 4 8 0.0000000039971
Manihot esculenta Chromosome06 1 CH_mes_116 4 8 0.00000000071705
Punica granatum NC_045128.1 1 CH_pgr_131 3 4 0.000000675585
Prunus persica Pp02 1 CH_ppe_245 3 6 0.00000333767
Populus trichocarpa Chr18 1 CH_ptr_199 3 3 0.00000042096
Quercus lobata 4 1 CH_qlo_344 4 16 0.0000000112628
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_393 3 7 0.00000467069
Schrenkiella parvula ch4-6 1 CH_spa_305 2 2 0.00078734
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_380 2 2 0.000557543
Vitis vinifera chr13 1 CH_vvi_144 4 11 0.0000000548273
Arabidopsis lyrata scaffold_4 2 CH_aly_139 3 4 0.000000522751
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 2 CH_arhy_292 3 5 0.00000112917
Arabidopsis thaliana Chr2 2 CH_ath_356 2 2 0.000286492
Corylus avellana 1 2 CH_cav_369 2 2 0.000230008
Citrus clementina scaffold_3 2 CH_ccl_494 2 2 0.000820311
Carya illinoinensis Chr14 2 CH_cil_210 3 3 0.0000000576299
Daucus carota DCARv2_S163.1 2 CH_dca_321 2 2 0.000191333
Erigeron canadensis Conyza_canadensis_scaffold:5 2 CH_eca_465 2 2 0.000448722
Eucalyptus grandis Chr05 2 CH_egr_429 4 10 0.0000000624451
Helianthus annuus HanXRQChr06 2 CH_han_179 4 8 0.0000000039971
Manihot esculenta Chromosome06 2 CH_mes_116 4 8 0.00000000071705
Punica granatum NC_045128.1 2 CH_pgr_131 3 4 0.000000675585
Prunus persica Pp02 2 CH_ppe_245 3 6 0.00000333767
Populus trichocarpa Chr18 2 CH_ptr_199 3 3 0.00000042096
Quercus lobata 4 2 CH_qlo_344 4 16 0.0000000112628
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_393 3 7 0.00000467069
Schrenkiella parvula ch4-6 2 CH_spa_305 2 2 0.00078734
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_380 2 2 0.000557543
Vitis vinifera chr13 2 CH_vvi_144 4 11 0.0000000548273

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001