Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.branched-chain amino acid.isovaleryl-CoA-dehydrogenase (IVDH)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_395 2 3 0.000211484
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_561 2 3 0.000269438
Cardamine hirsuta Chr5 1 CH_chi_257 2 2 0.0000691204
Helianthus annuus HanXRQChr07 1 CH_han_518 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_2 1 CH_lsa_379 2 3 0.000154198
Acer truncatum chr3 2 CH_acertr_395 2 3 0.000211484
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_561 2 3 0.000269438
Cardamine hirsuta Chr5 2 CH_chi_257 2 2 0.0000691204
Helianthus annuus HanXRQChr07 2 CH_han_518 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_2 2 CH_lsa_379 2 3 0.000154198

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001