Functional clusters
Information
- Type MapMan
- Description Amino acid metabolism.degradation.gamma-aminobutyrate (GABA).succinate formation.NAD-dependent succinic semialdehyde dehydrogenase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Helianthus annuus | HanXRQChr11 | 1 | CH_han_215 | 3 | 3 | 0.000000044799 |
| Physcomitrium patens | Chr26 | 1 | CH_ppa_240 | 2 | 2 | 0.000367636 |
| Vitis vinifera | chr19 | 1 | CH_vvi_118 | 3 | 3 | 0.0000000086787 |
| Helianthus annuus | HanXRQChr11 | 2 | CH_han_215 | 3 | 3 | 0.000000044799 |
| Physcomitrium patens | Chr26 | 2 | CH_ppa_240 | 2 | 2 | 0.000367636 |
| Vitis vinifera | chr19 | 2 | CH_vvi_118 | 3 | 3 | 0.0000000086787 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |