Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.arginine.urease accessory protein activities.urease accessory protein (ureG)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Chenopodium quinoa C_Quinoa_Scaffold_1747 1 CH_cqu_472 2 3 0.000426422
Davidia involucrata GWHABJS00000020 1 CH_din_342 2 2 0.000150038
Magnolia biondii Chr07 1 CH_mbi_587 2 5 0.000485625
Papaver somniferum NC_039362.1 1 CH_pso_516 2 3 0.000202706
Populus trichocarpa Chr02 1 CH_ptr_353 2 3 0.000173395
Quercus lobata 5 1 CH_qlo_864 2 4 0.000309757
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_86 4 4 0.000000000000190078
Tripterygium wilfordii NC_052245.1 1 CH_twi_215 2 2 0.000167252
Chenopodium quinoa C_Quinoa_Scaffold_1747 2 CH_cqu_472 2 3 0.000426422
Davidia involucrata GWHABJS00000020 2 CH_din_342 2 2 0.000150038
Magnolia biondii Chr07 2 CH_mbi_587 2 5 0.000485625
Papaver somniferum NC_039362.1 2 CH_pso_516 2 3 0.000202706
Populus trichocarpa Chr02 2 CH_ptr_353 2 3 0.000173395
Quercus lobata 5 2 CH_qlo_864 2 4 0.000309757
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_86 4 4 0.000000000000190078
Tripterygium wilfordii NC_052245.1 2 CH_twi_215 2 2 0.000167252

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001