Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.prephenate aminotransferase (PPA-AT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044373.1 1 CH_cansat_226 2 2 0.0000656642
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_330 2 3 0.000134614
Glycine max Gm11 1 CH_gma_444 2 2 0.000227734
Phaseolus vulgaris Chr01 1 CH_pvu_356 2 2 0.000220418
Rhododendron simsii chr08 1 CH_rsi_436 2 2 0.000193592
Vigna mungo CM024070.1 1 CH_vmu_289 2 2 0.000193842
Cannabis sativa NC_044373.1 2 CH_cansat_226 2 2 0.0000656642
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_330 2 3 0.000134614
Eucalyptus grandis Chr09 2 CH_egr_733 3 52 0.000113395
Glycine max Gm11 2 CH_gma_444 2 2 0.000227734
Phaseolus vulgaris Chr01 2 CH_pvu_356 2 2 0.000220418
Rhododendron simsii chr08 2 CH_rsi_436 2 2 0.000193592
Vigna mungo CM024070.1 2 CH_vmu_289 2 2 0.000193842

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001