Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 1 CH_amhyb_141 2 2 0.0000841751
Ceratophyllum demersum 2 1 CH_cde_234 2 2 0.000473878
Davidia involucrata GWHABJS00000012 1 CH_din_340 2 2 0.000150038
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_482 2 2 0.0000398653
Rhododendron simsii chr07 1 CH_rsi_493 2 2 0.000387184
Sequoiadendron giganteum chr5 1 CH_sgi_265 4 4 0.00000000000520279
Utricularia gibba unitig_699 1 CH_ugi_162 2 2 0.0000734592
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 2 CH_amhyb_141 2 2 0.0000841751
Ceratophyllum demersum 2 2 CH_cde_234 2 2 0.000473878
Davidia involucrata GWHABJS00000012 2 CH_din_340 2 2 0.000150038
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_482 2 2 0.0000398653
Rhododendron simsii chr07 2 CH_rsi_493 2 2 0.000387184
Sequoiadendron giganteum chr5 2 CH_sgi_265 4 4 0.00000000000520279
Utricularia gibba unitig_699 2 CH_ugi_162 2 2 0.0000734592

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001