Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.methylthioadenosine nucleosidase (MTN)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Glycine max Gm04 1 CH_gma_414 2 2 0.000227734
Glycine max Gm06 1 CH_gma_415 2 2 0.000227734
Punica granatum NC_045130.1 1 CH_pgr_88 3 3 0.0000000337834
Prunus persica Pp08 1 CH_ppe_314 2 2 0.0000745962
Papaver somniferum NC_039363.1 1 CH_pso_466 2 2 0.00013514
Papaver somniferum NC_039358.1 1 CH_pso_467 2 2 0.00013514
Phaseolus vulgaris Chr09 1 CH_pvu_255 2 2 0.0000734727
Rhododendron simsii chr11 1 CH_rsi_301 3 14 0.0000227172
Salvia bowleyana GWHASIU00000006 1 CH_sbo_272 2 2 0.000045498
Trochodendron aralioides group4 1 CH_tar_323 2 2 0.00018011
Vigna mungo CM024072.1 1 CH_vmu_172 2 2 0.0000646141
Eucalyptus grandis Chr07 2 CH_egr_341 3 3 0.00000000513834
Glycine max Gm04 2 CH_gma_414 2 2 0.000227734
Glycine max Gm06 2 CH_gma_415 2 2 0.000227734
Punica granatum NC_045130.1 2 CH_pgr_88 3 3 0.0000000337834
Prunus persica Pp08 2 CH_ppe_314 2 2 0.0000745962
Papaver somniferum NC_039363.1 2 CH_pso_466 2 2 0.00013514
Papaver somniferum NC_039358.1 2 CH_pso_467 2 2 0.00013514
Phaseolus vulgaris Chr09 2 CH_pvu_255 2 2 0.0000734727
Rhododendron simsii chr11 2 CH_rsi_301 3 14 0.0000227172
Salvia bowleyana GWHASIU00000006 2 CH_sbo_272 2 2 0.000045498
Trochodendron aralioides group4 2 CH_tar_323 2 2 0.00018011
Vigna mungo CM024072.1 2 CH_vmu_172 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001