Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.S-methylmethionine cycle.methionine S-methyltransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr6 1 CH_camsi_602 2 3 0.000137561
Davidia involucrata GWHABJS00000002 1 CH_din_316 2 2 0.000150038
Lonicera japonica GWHAAZE00000005 1 CH_lonja_449 2 2 0.000179662
Physcomitrium patens Chr11 1 CH_ppa_136 2 2 0.000183818
Striga asiatica scaffold8 1 CH_sas_88 2 2 0.000187611
Vanilla planifolia CM028150.1 1 CH_vpl_252 2 2 0.000221664
Camellia sinensis var. sinensis Chr6 2 CH_camsi_602 2 3 0.000137561
Davidia involucrata GWHABJS00000002 2 CH_din_316 2 2 0.000150038
Eucalyptus grandis Chr07 2 CH_egr_660 2 2 0.0000585274
Gossypium hirsutum A05 2 CH_ghi_600 2 2 0.000267016
Lonicera japonica GWHAAZE00000005 2 CH_lonja_449 2 2 0.000179662
Physcomitrium patens Chr11 2 CH_ppa_136 2 2 0.000183818
Striga asiatica scaffold8 2 CH_sas_88 2 2 0.000187611
Vanilla planifolia CM028150.1 2 CH_vpl_252 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001