Functional clusters
Information
- Type MapMan
- Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate epimerase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrC03 | 1 | CH_bca_978 | 2 | 2 | 0.00059854 |
Brassica oleracea | C3 | 1 | CH_bol_376 | 2 | 2 | 0.000490292 |
Sequoiadendron giganteum | chr4 | 1 | CH_sgi_389 | 3 | 3 | 0.00000000355983 |
Brassica carinata | ChrC03 | 2 | CH_bca_978 | 2 | 2 | 0.00059854 |
Brassica oleracea | C3 | 2 | CH_bol_376 | 2 | 2 | 0.000490292 |
Sequoiadendron giganteum | chr4 | 2 | CH_sgi_389 | 3 | 3 | 0.00000000355983 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |