Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.asparagine.L-asparaginase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-3 1 CH_aar_262 2 3 0.000821031
Brassica carinata ChrB08 1 CH_bca_197 3 5 0.0000000274164
Brassica rapa A10 1 CH_bra_268 2 2 0.000257588
Camellia sinensis var. sinensis Chr4 1 CH_camsi_824 2 2 0.000458547
Cannabis sativa NC_044372.1 1 CH_cansat_362 2 3 0.000590945
Gossypium hirsutum A12 1 CH_ghi_292 3 3 0.000000486611
Lupinus albus Lalb_Chr14 1 CH_lal_409 2 2 0.000787236
Magnolia biondii Chr19 1 CH_mbi_421 2 3 0.000145695
Malus domestica Chr06 1 CH_mdo_720 2 3 0.000682551
Pisum sativum chr5LG3 1 CH_psa_378 2 2 0.000521635
Quercus lobata 10 1 CH_qlo_941 2 3 0.00046464
Striga asiatica scaffold28 1 CH_sas_95 2 3 0.000187611
Selenicereus undatus Scaffold_10417 1 CH_sun_199 2 2 0.000217992
Trifolium pratense Tp57577_TGAC_v2_LG5 1 CH_tpr_367 2 2 0.000454184
Aethionema arabicum LG-3 2 CH_aar_262 2 3 0.000821031
Brassica carinata ChrB08 2 CH_bca_197 3 5 0.0000000274164
Brassica rapa A10 2 CH_bra_268 2 2 0.000257588
Camellia sinensis var. sinensis Chr4 2 CH_camsi_824 2 2 0.000458547
Cannabis sativa NC_044372.1 2 CH_cansat_362 2 3 0.000590945
Eucalyptus grandis Chr02 2 CH_egr_777 2 2 0.000175582
Gossypium hirsutum A12 2 CH_ghi_292 3 3 0.000000486611
Lupinus albus Lalb_Chr14 2 CH_lal_409 2 2 0.000787236
Magnolia biondii Chr19 2 CH_mbi_421 2 3 0.000145695
Malus domestica Chr06 2 CH_mdo_720 2 3 0.000682551
Pisum sativum chr5LG3 2 CH_psa_378 2 2 0.000521635
Quercus lobata 10 2 CH_qlo_941 2 3 0.00046464
Striga asiatica scaffold28 2 CH_sas_95 2 3 0.000187611
Selenicereus undatus Scaffold_10417 2 CH_sun_199 2 2 0.000217992
Trifolium pratense Tp57577_TGAC_v2_LG5 2 CH_tpr_367 2 2 0.000454184

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001