Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.glutamate family.histidine.bifunctional phosphoribosyl-ATP diphosphatase and phosphoribosyl-AMP cyclohydrolase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapa A09 1 CH_bra_302 2 3 0.000386368
Magnolia biondii Chr07 1 CH_mbi_420 2 3 0.000145695
Malus domestica Chr03 1 CH_mdo_164 3 3 0.00000000862825
Nelumbo nucifera chr7 1 CH_nnu_327 2 2 0.000130804
Quercus lobata CM012294 1 CH_qlo_88 6 11 2.66928e-17
Selaginella moellendorffii scaffold_10 1 CH_smo_111 2 3 0.000280099
Brassica rapa A09 2 CH_bra_302 2 3 0.000386368
Magnolia biondii Chr07 2 CH_mbi_420 2 3 0.000145695
Malus domestica Chr03 2 CH_mdo_164 3 3 0.00000000862825
Nelumbo nucifera chr7 2 CH_nnu_327 2 2 0.000130804
Quercus lobata CM012294 2 CH_qlo_88 6 11 2.66928e-17
Selaginella moellendorffii scaffold_10 2 CH_smo_111 2 3 0.000280099

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001