Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.glutamate family.histidine.ATP phosphoribosyl transferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_5 1 CH_ccl_307 2 2 0.0000820311
Hydrangea macrophylla Hma1.2p1_1108F.1 1 CH_hma_236 2 2 0.000111086
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_478 2 3 0.000462586
Quercus lobata CM012294 1 CH_qlo_248 4 8 0.000000000144484
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_145 4 7 0.0000000000997752
Citrus clementina scaffold_5 2 CH_ccl_307 2 2 0.0000820311
Eucalyptus grandis Chr07 2 CH_egr_682 2 2 0.0000585274
Hydrangea macrophylla Hma1.2p1_1108F.1 2 CH_hma_236 2 2 0.000111086
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_478 2 3 0.000462586
Quercus lobata CM012294 2 CH_qlo_248 4 8 0.000000000144484
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_145 4 7 0.0000000000997752

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001