Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.6-phosphogluconate dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr12 1 CH_camsi_460 3 10 0.0000132385
Fragaria x ananassa Fvb4-1 1 CH_fan_171 3 4 0.000000451918
Populus trichocarpa Chr04 1 CH_ptr_548 2 2 0.000867002
Vanilla planifolia CM028156.1 1 CH_vpl_271 2 2 0.000221664
Camellia sinensis var. sinensis Chr12 2 CH_camsi_460 3 10 0.0000132385
Fragaria x ananassa Fvb4-1 2 CH_fan_171 3 4 0.000000451918
Populus trichocarpa Chr04 2 CH_ptr_548 2 2 0.000867002
Vanilla planifolia CM028156.1 2 CH_vpl_271 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001